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Record W1966938297 · doi:10.1111/jbi.12267

Geographical origins of North American <i>Rhodiola</i> (Crassulaceae) and phylogeography of the western roseroot, <i>Rhodiola integrifolia</i>

2014· article· en· W1966938297 on OpenAlexafffund
Heidi J. Guest, Geraldine A. Allen

Bibliographic record

VenueJournal of Biogeography · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMedicinal Plants and Bioactive Compounds
Canadian institutionsUniversity of Victoria
FundersNatural Sciences and Engineering Research Council of CanadaUniversity of Victoria
KeywordsBeringiaPhylogeographyRange (aeronautics)BiologyInternal transcribed spacerRhodiolaGenetic structureEcologyPhylogenetic treeGeographyGenetic variationSalidrosideArctic

Abstract

fetched live from OpenAlex

Abstract Aim Complex migration histories with repeated range shifts during the Pleistocene characterize many arctic–alpine plants. Identifying these patterns provides insight into the causes of current distributions and possible responses to climate warming. We investigated patterns of genetic variation in North American species of a widespread Northern Hemisphere plant group to test different hypotheses of origin and refugial persistence. Location North America. Methods We used a phylogeographical approach to investigate the geographical origins of North American Rhodiola , especially the widespread western species R. integrifolia . Populations were sampled over much of the North American range (66 of R. integrifolia , 6 of R. rhodantha and 4 of R. rosea ). We performed maximum likelihood phylogenetic analyses on sequences of the nuclear internal transcribed spacer (ITS) region and the plastid trn H –psb A intergenic spacer, and analysed geographical patterns of haplotype distribution and genetic diversity using plastid restriction‐site and sequence data from all populations. Results Separate lineages of Rhodiola dispersed into North America via the Bering Strait ( R. integrifolia and R. rhodantha ) and amphi‐Atlantic regions ( R. rosea ). Genetic patterns within R. integrifolia indicate southward spread from Beringia, with subsequent persistence in both northern and southern refugia. Rhodiola integrifolia and the regional endemic R. rhodantha show evidence of past hybridization (resulting in chloroplast capture) where their ranges overlap in the southern Rocky Mountains. However, phylogenetic evidence suggests that both species are closely related to Asian taxa and probably migrated independently into North America. Main conclusions The current geographical distributions and genetic structure of North American Rhodiola are the result of a complex history including multiple migrations into North America, persistence in multiple refugia during glaciations, and past hybridization. This complexity of processes within one group underscores the diverse history of arctic–alpine plants and the likelihood of divergent responses to changing environments.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.034
Threshold uncertainty score0.067

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.219
Teacher spread0.214 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations28
Published2014
Admission routes2
Has abstractyes

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