Geobiodiversity Database (GBDB) in stratigraphic, palaeontological and palaeogeographic research: graptolites as an example
Why this work is in the frame
A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.
Bibliographic record
Abstract
The Geobiodiversity Database (GBDB) Project is dedicated to the construction and maintenance of a web-enabled taxonomic, stratigraphic and geographic database for information gathered from the fossil record. Its goal is to facilitate regional and global scientific collaborations focused on studying the history, diversity, geography and environmental context of life on Earth. After 7 years of development, its abundant data resources and diverse integrated functions make it a useful platform for stratigraphic, palaeontological and palaeogeographic analysis. Graptolites are the first major fossil group that has been the focus of our efforts to compile, standardize, digitize and analyse over the past several years. Here, we use the graptolite group as an example to introduce the major data resources and functionality of the GBDB.
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.002 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.001 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.001 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it