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Record W1969921598 · doi:10.1071/am13030

Molecular characterisation of the signaling molecules TCR? and ZAP-70 in the marsupial Macropus eugenii (tammar wallaby)

2014· article· en· W1969921598 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueAustralian Mammalogy · 2014
Typearticle
Languageen
FieldImmunology and Microbiology
TopicT-cell and B-cell Immunology
Canadian institutionsSmiths Detection (Canada)
Fundersnot available
KeywordsTammar wallabyBiologyMarsupialT-cell receptorMacropusMonotremeComplementary DNAImmune systemGeneticsCell biologyGeneT cellZoology

Abstract

fetched live from OpenAlex

The debate about the state of the marsupial immune system has entered a new era with the recent publication of the tammar wallaby (Macropus eugenii) genome. The aim of this study was to investigate two important components of the T-cell signalling cascade in M. eugenii to determine whether there are any significant differences between the genome and the expressed gene sequences and to elucidate the putative structures. Molecular methods, predominantly RACE PCR and RT–PCR, using cDNA obtained from mRNA isolated from M. eugenii lymph node tissue, were used to determine the sequence of functional motifs in the TCR? and ZAP-70 molecules. Structure prediction algorithms were used to determine their secondary and tertiary structures for comparison with the structures elucidated by X-ray crystallography in humans and other mammals. Differences between the genome and the expressed sequence were found in the ZAP-70 molecule. Homology modelling demonstrated that the predicted structure of the TCR? molecule was different from those of other mammals while the structure of the ZAP-70 molecule was very similar. It is concluded that the T-cell signalling cascade in the adaptive immune system of marsupials shows similar features to that of other mammals.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.068
Threshold uncertainty score0.623

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.214
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it