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Record W1970568909 · doi:10.4141/p05-079

An assessment of genetic variation and relationships of smooth bromegrass cultivars and accessions using AFLP markers

2006· article· en· W1970568909 on OpenAlexaffvenueabout
Y. Li, Bruce Coulman

Bibliographic record

VenueCanadian Journal of Plant Science · 2006
Typearticle
Languageen
FieldEnvironmental Science
TopicTurfgrass Adaptation and Management
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsAmplified fragment length polymorphismCultivarBiologyGenetic diversityGenetic variationAgronomyPerennial plantBotanyHorticulturePopulationGenetics

Abstract

fetched live from OpenAlex

Smooth bromegrass (Bromus inermis Leyss.) is an important cultivated perennial grass species in temperate regions of North America. Information on the genetic diversity and the relationships of available populations is necessary for an effective cultivar improvement program in this crop. The objective of this study was to assess and characterize the genetic variation and relationships of smooth bromegrass cultivars and genebank accessions on the basis of amplified fragment length polymorphism (AFLP) markers. Fourteen wild accessions and 23 cultivars representing several regions of the world were analyzed using six AFLP primer combinations. Of the total number of markers amplified, 90% was polymorphic. A set of 159 robust polymorphic markers was used to genotype the individuals. No AFLP band was specific to an individual bromegrass accession, but bands appeared in different frequencies among the populations. The molecular marker variation within populations of smooth bromegrass (79%) was higher than that among populations (21%). Cultivars developed in the former USSR were the most variable, followed by those developed in the United States of America and Canada. As a group, cultivars were more variable than wild genebank accessions. All of the North American smooth bromegrass cultivars were clustered together, suggesting a common ancestry of North American smooth brome cultivars developed over the past 60 yr. Cultivars developed in the former USSR occurred in several different clusters in the dendrogram, indicating a high among-cultivar diversity. Key words: Bromegrass, accessions, AFLP markers

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.267
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2006
Admission routes3
Has abstractyes

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Same venueCanadian Journal of Plant ScienceSame topicTurfgrass Adaptation and ManagementFrench-language works237,207