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Record W1976244785 · doi:10.1118/1.4889195

MO‐G‐BRF‐02: Enhancement of Texture‐Based Metastasis Prediction Models Via the Optimization of PET/MRI Acquisition Protocols

2014· article· en· W1976244785 on OpenAlexaff
Martin Vallières, S. Laberge, Levesque I R., Naqa I El

Bibliographic record

VenueMedical Physics · 2014
Typearticle
Languageen
FieldMedicine
TopicRadiomics and Machine Learning in Medical Imaging
Canadian institutionsMcGill University
Fundersnot available
KeywordsNuclear medicineRadiomicsComputer scienceMonte Carlo methodIterative reconstructionMedical imagingArtificial intelligenceMedicineMathematicsStatistics

Abstract

fetched live from OpenAlex

Purpose: We have previously identified a prediction model of lung metastases at diagnosis of soft‐tissue sarcomas (STS) that is composed of two textural features extracted from FDG‐PET and T1‐weighted (T1w) MRI scans. The goal of this study is to evaluate whether the optimization in FDGPET and MRI acquisition parameters would enhance the prediction performance of texture‐based models. Methods: Ten FDG‐PET and T1w‐ MRI digitized tumor models were generated from imaging data of STS patients who underwent pre‐treatment clinical scans between 2005 and 2011. Five of ten patients eventually developed lung metastases. Numerically simulated MR images were produced using echo times (TE) of 2 and 4 times the nominal clinical parameter (TEc), and repetition times (TR) of 0.5, 0.67, 1.5 and 2 times the nominal clinical parameter (TRc) found in the DICOM headers (TEc range: 9–13 ms, TRc range: 410‐667 ms). PET 2D images were simulated using Monte‐Carlo and were reconstructed using an ordered‐subsets expectation maximization (OSEM) algorithm with 1 to 32 iterations and a post‐reconstruction Gaussian filter of 0, 2, 4 or 6 mm width. For all possible combinations of PET and MRI acquisition parameters, the prediction model was constructed using logistic regression with new coefficients, and its associated prediction performance for lung metastases was evaluated using the area under the ROC curve (AUC). Results: The prediction performance over all simulations yielded AUCs ranging from 0.7 to 1. Notably, TR values below or equal to TRc and higher PET post‐reconstruction filter widths yielded higher prediction performance. The best results were obtained with a combination of 4*TEc, TRc, 30 OSEM iterations and 2mm filter width. Conclusion: This work indicates that texture‐based metastasis prediction models could be improved using optimized choices of FDG‐PET and MRI acquisition protocols. This principle could be generalized to other texture‐based models.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.006
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.004
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.298
Teacher spread0.283 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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