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DIATOM‐BASED ENVIRONMENTAL INFERENCES AND MODEL COMPARISONS FROM 494 NORTHEASTERN NORTH AMERICAN LAKES<sup>1</sup>

2007· article· en· W1976498747 on OpenAlexaffabout
Brian K. Ginn, Brian F. Cumming, John P. Smol

Bibliographic record

VenueJournal of Phycology · 2007
Typearticle
Languageen
FieldEnvironmental Science
TopicSoil and Water Nutrient Dynamics
Canadian institutionsQueen's University
Fundersnot available
KeywordsDiatomPaleolimnologyInferenceNova scotiaEcologyNutrientEnvironmental scienceBiologyPhysical geographyOceanographyGeologyGeographyComputer science

Abstract

fetched live from OpenAlex

The relationships between diatom assemblages and important limnological variables were investigated in 494 lakes from northeastern North America (Pennsylvania, USA, to Nova Scotia, Canada). The limnological variable most significantly related to diatom assemblages was lake water pH, although dissolved organic carbon and nutrients were also important. Based on these strong relationships, highly significant diatom‐based inference models were developed to reconstruct key limnological variables based on diatom assemblages using weighted averaging (WA), maximum likelihood (ML), and modern analogs technique (MAT). The performances of the pH‐inference models were high, similar, and significant (WA: r 2 boot = 0.89, root mean squared error of prediction (RMSEP) = 0.43; ML: r 2 boot = 0.89, RMSEP = 0.45; MAT: r 2 boot = 0.89, RMSEP = 0.46). In addition, distribution of sites along a pH gradient did not have the anticipated bias, especially with respect to the WA model, although an evenly distributed study set did result in slightly less noise. While some regionally specific information may be lost by utilizing a large number of lakes from a wide geographic area, the broad limnological gradients allow a more realistic, accurate, and complete description of the ecological characteristics of diatom species. In addition to providing new autecological data on diatoms for northeastern North America, these inference models can now be used to infer accurately and precisely lake water pH and associated variables for limnologists and lake managers.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.134
Threshold uncertainty score0.529

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.220
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations52
Published2007
Admission routes2
Has abstractyes

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