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Record W1981547933 · doi:10.1103/physreve.85.016709

Optimizing the accuracy of lattice Monte Carlo algorithms for simulating diffusion

2012· article· en· W1981547933 on OpenAlexaff
Mykyta V. Chubynsky, Gary W. Slater

Bibliographic record

VenuePhysical Review E · 2012
Typearticle
Languageen
FieldEngineering
TopicLattice Boltzmann Simulation Studies
Canadian institutionsUniversity of Ottawa
FundersNational Human Genome Research Institute
KeywordsMonte Carlo methodAlgorithmDiagonalLattice (music)Boundary value problemStatistical physicsHybrid Monte CarloMathematicsComputer scienceMarkov chain Monte CarloPhysicsMathematical analysisGeometry

Abstract

fetched live from OpenAlex

The behavior of a lattice Monte Carlo (LMC) algorithm (if it is designed correctly) must approach that of the continuum system that it is designed to simulate as the time step and the mesh step tend to zero. However, we show for an algorithm for unbiased particle diffusion that if one of these two parameters remains fixed, the accuracy of the algorithm is optimal for a certain finite value of the other parameter. In one dimension, the optimal algorithm with moves to the two nearest neighbor sites reproduces the correct second and fourth moments (and minimizes the error for the higher moments at large times) of the particle distribution and preserves the first two moments of the first-passage time distributions. In two and three dimensions, the same level of accuracy requires simultaneous moves along two axes ("diagonal" moves). Such moves attempting to cross an impenetrable boundary should be projected along the boundary, rather than simply rejected. We also treat the case of absorbing boundaries. We discuss the relation between optimally accurate LMC algorithms and a particular case of lattice Boltzmann (LB) algorithms for simulating diffusion and compare the computational efficiency of optimal LMC and optimal LB algorithms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.030
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.007
Threshold uncertainty score0.023

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.030
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0020.002
Open science0.0010.001
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.054
GPT teacher head0.349
Teacher spread0.295 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2012
Admission routes1
Has abstractyes

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Same venuePhysical Review ESame topicLattice Boltzmann Simulation StudiesFrench-language works237,207