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Record W1983224532 · doi:10.1021/nl015672h

Self-Assembly of Frayed Wires and Frayed-Wire Networks:  Nanoconstruction with Multistranded DNA

2002· article· en· W1983224532 on OpenAlexaff
Michael A. Batalia, Ekaterina Protozanova, Robert B. Macgregor, Dorothy A. Erie

Bibliographic record

VenueNano Letters · 2002
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAdvanced biosensing and bioanalysis techniques
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsDNABiotinylationNanotechnologyMaterials scienceScanning Force MicroscopyCore (optical fiber)BiophysicsAtomic force microscopyChemistryComposite materialBiochemistryBiology

Abstract

fetched live from OpenAlex

New types of self-assembled 2-D and 3-D DNA networks are presented and characterized using scanning force microscopy. The building blocks of these networks are guanine-rich DNA sequences, d(A 15 G 15 ) and biotinylated-d(A 15 G 15 ). These sequences self-assemble into high molecular weight structures, frayed wires, that are composed of a multistranded guanine core with single-stranded adenosine tracts emanating from the core at ∼6 nm intervals. Avidin peroxidase was attached to the biotinylated frayed wires with retention of activity, demonstrating that these structures can be used as scaffolds to support multiple copies of non-DNA molecules. Finally, the frayed wires were linked together with CT 15 or T 15 to form large 2- and 3-dimensional networks.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.519

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.203
Teacher spread0.199 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations56
Published2002
Admission routes1
Has abstractyes

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