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Record W1983390182 · doi:10.1139/x00-198

Optimum breeding generation interval considering buildup of relatedness

2001· article· en· W1983390182 on OpenAlexvenueno aff
D. Lindgren

Bibliographic record

VenueCanadian Journal of Forest Research · 2001
Typearticle
Languageen
FieldEnvironmental Science
TopicForest ecology and management
Canadian institutionsnot available
Fundersnot available
KeywordsSelection (genetic algorithm)Genetic gainPopulationInbreedingBiologyInbreeding depressionStatisticsPopulation sizeMathematicsGenetic variationDemographyComputer science

Abstract

fetched live from OpenAlex

Models taking genetic gain, relatedness, delay at generation turnover, and breeding population size into account have been developed to optimize selection age and generation interval. Relatedness (expressed as group coancestry) and average breeding value for the breeding population are merged into a joint index ("group merit"). The negative impact of group coancestry (like potential inbreeding depression) is expressed in a scale compatible with breeding value. Group merit measures the desirable characteristic of a breeding population. Annual increase of group merit is the criterion for comparing alternatives. Optimum generation interval is when annual group merit increase is highest. Generally the optimum selection age becomes higher when increase in relatedness is considered. We quantify the influence of relatedness penalty, early-mature genetic correlation, breeding population size, and delay at generation turnover on optimum selection age. A reasonable large population counteracts the increase of relatedness and, thus, favors early selection. Early selection can have a negative impact if a small early selection gain does not compensate for the buildup of relatedness at generation turnover. Conditions for this to occur are quantified. Early selection requires sufficient high juvenile-mature correlation to have a positive effect; this requirement can be reduced by using a large breeding population. The methods developed were applied to a number of situations relevant to forest tree improvement.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.007
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.004
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.067
GPT teacher head0.304
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2001
Admission routes1
Has abstractyes

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Same venueCanadian Journal of Forest Research→Same topicForest ecology and management→French-language works237,207→