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Record W1983394953 · doi:10.1097/mib.0000000000000012

Reply to Mendall

2014· letter· en· W1983394953 on OpenAlexaff
Gordon W. Moran, Subrata Ghosh

Bibliographic record

VenueInflammatory Bowel Diseases · 2014
Typeletter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicInflammatory Bowel Disease
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsMedicine

Abstract

fetched live from OpenAlex

We thank Dr. Mendall for his comments1 about our study describing the increasing average weight of patients with Crohn's disease in clinical trials over the years and the significant correlation between this novel finding and disease activity.2 This was a hypothesis-generating study of the data published in connection with previous clinical trials. The author states that fecal calprotectin is a useful surrogate marker for Crohn's disease risk and could thus be useful in future epidemiological studies. The role of fecal calprotectin in the association between obesity and Crohn's disease is a valid one. It was not possible to address this in our study of previous clinical trials of therapeutic agents. The associations ascribed to obesity, such as decreased physical activity3 and a high-fat diet,4 are ecological and do not impute causality with Crohn's disease. Adiposity in general may be proinflammatory as a result of multiple adipokine and cytokine effects. We agree that obesity might have a causal effect in Crohn's disease and could possibly affect its clinical outcome.2 Even in the absence of adiposity, a high-fat diet might accelerate disease pathogenesis in Crohn's disease,5 and alteration of the microbiome and barrier function could underlie this association.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.043
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.079
Threshold uncertainty score0.043

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0050.043
Meta-epidemiology (narrow)0.0010.002
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0010.001
Science and technology studies0.0070.005
Scholarly communication0.0060.005
Open science0.0030.004
Research integrity0.0790.060
Insufficient payload (model declined to judge)0.0100.006

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.233
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractno

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