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Record W1984594965 · doi:10.1021/ja807984f

Dissociative Solvolytic Cleavage of Methyl (<i>ortho</i>-Carboxymethyl)Aryl Phosphate Diesters Mediated by Yb<sup>3+</sup> in Methanol Gives a 10<sup>12</sup>-Fold Rate Acceleration Attributable to Leaving Group Assistance

2008· article· en· W1984594965 on OpenAlexaff
David Edwards, Alexei A. Neverov, R. S. Brown

Bibliographic record

VenueJournal of the American Chemical Society · 2008
Typearticle
Languageen
FieldChemistry
TopicChemical Reaction Mechanisms
Canadian institutionsQueen's University
Fundersnot available
KeywordsChemistryArylSubstituentMedicinal chemistryEnzyme kineticsLeaving groupMethanolReaction rate constantStereochemistryCatalysisKineticsOrganic chemistryActive site

Abstract

fetched live from OpenAlex

The Yb 3+ -catalyzed cleavage of a series of eight methyl aryl phosphates ( 2a − h ) where the aryl groups all contain an ortho -methoxycarbonyl group was studied in acidic methanol from 1.34 ≤ s s pH ≤ 3.34 at 25 °C. All substrates show saturation binding of the metal ion that is analyzed to provide a conditional binding constant ( K b ) for a 1:1 substrate/Yb 3+ complex and catalytic rate constant ( k cat ) that varies between about 2 × 10 −3 and 50 × 10 −3 s −1 over the range of substrates. Detailed analysis indicates that at very low concentration of Yb 3+, 3 equiv of substrate are bound, and with increasing [Yb 3+ ], the binding changes to a 1:1 complex which decomposes by a pathway independent of s s pH over the range investigated. Control studies show that substrates without the o -methoxycarbonyl group still bind to the Yb 3+ with approximately the same strength as do the o -methoxycarbonyl containing substrates but have no observable reaction when bound. A Jaffé plot of the k cat vs substituent σ-values indicates that, during the catalyzed reactions of 2a − h, the phenoxy-O and C(O)OCH 3 groups accommodate negative and positive charge respectively, the ρ phosphate and ρ C(O)OMe values being (1.84 ± 0.11) and (−0.85 ± 0.14). For all these substrates, the final reaction products are dimethyl phosphate and the Yb 3+ complex of the phenoxide. A study of the binding of the parent phenols to Yb 3+ indicates that log( K bind ) = (0.84 ± 0.06) s s p K a + (3.4 ± 0.9), r 2 = 0.9664 for phenols containing the o -methoxycarbonyl group; for those lacking that substituent log( K bind ) = (0.96 ± 0.04) s s p K a − (1.73 ± 0.4), ( r 2 = 0.99). For the catalyzed reaction the β lg = −0.48, while the β eq = −0.95, leading to a Leffler parameter of α = 0.51. A mechanism is presented for the catalyzed reaction which is highly dissociative, having a transition state where the Yb 3+ translocates during the cleavage reaction to assist the leaving group’s departure with weak nucleophilic assistance by the solvent methanol. A comparison of the catalyzed rate of reaction with a computed rate of reaction attributable to solvent alone indicates that Yb 3+ provides leaving group assistance on the order of 10 12 -fold, stabilizing the transition state for cleavage by some 16 kcal/mol.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.251
Teacher spread0.234 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations19
Published2008
Admission routes1
Has abstractyes

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