Improved method for automatic cerebrovascular labelling using stochastic tunnelling
Bibliographic record
Abstract
The complexity and high morphological variation of cerebral vasculature make comparison and analysis of the vessel patterning difficult and laborious. A framework for automatic labelling of the cerebral vessels in high resolution 3D images has been introduced in the literature that addresses this need. The segmented vasculature is represented as an attributed relational graph. Each vessel segment is an edge in the graph with local attributes such as diameter and length, as well as relational features representing the connectivity of the vessel segments. Each edge in the graph is automatically labelled with an anatomical name through a stochastic relaxation algorithm. In this paper, we compare the performance of four different optimization schemes, including stochastic tunnelling, for automatic labelling. We validated our method on 7 micro-CT images of C57Bl/6J mice with a leave-one-out test. The mean recognition rate of complete cerebrovasculature using stochastic tunnelling is 80% and shows a 2% (>60 vessel segments) improvement compared to simulated annealing optimization.
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.002 |
| Meta-epidemiology (narrow) | 0.001 | 0.001 |
| Meta-epidemiology (broad) | 0.001 | 0.001 |
| Bibliometrics | 0.001 | 0.001 |
| Science and technology studies | 0.000 | 0.001 |
| Scholarly communication | 0.001 | 0.001 |
| Open science | 0.001 | 0.001 |
| Research integrity | 0.001 | 0.001 |
| Insufficient payload (model declined to judge) | 0.002 | 0.001 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".