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Record W1987746522 · doi:10.1139/f2012-035

Evaluating sampling efficiency in depletion surveys using hierarchical Bayes

2012· article· en· W1987746522 on OpenAlexvenueno aff
Thomas F. Bohrmann, Mary C. Christman

Bibliographic record

VenueCanadian Journal of Fisheries and Aquatic Sciences · 2012
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine and fisheries research
Canadian institutionsnot available
FundersNational Science Foundation
KeywordsAbundance (ecology)Sampling (signal processing)Bayes' theoremBayesian hierarchical modelingSample (material)Bayesian probabilityCallinectesResource depletionEnvironmental scienceSample size determinationChesapeake bayEstimationAbundance estimationStatisticsBayes estimatorComputer scienceEcologyBiologyMathematicsChemistryEngineering

Abstract

fetched live from OpenAlex

Estimating animal abundance is essential to natural resource management and conservation. However, the cost associated with abundance estimation can be high for populations that are difficult to sample. Researchers, particularly in fisheries management, often sample such populations using depletion or removal surveys. Depletion surveys rely upon successive removals of animals, without replacement, to estimate abundance. These researchers also must decide on other sampling protocol, including the depletion technique, which may include depletion gear-type, vessel, or personnel. To inform this decision, we propose a supplement to the hierarchical Bayesian models recently introduced for the analysis of depletion data. Using Bayesian sample size methodology along with hierarchical modeling, we present a method for estimating the efficiency of previously employed depletion techniques. Using this method, the researcher can estimate the expected variability in abundance estimates for each depletion technique and apply this information to future decisions. Additionally, this method allows the estimation of expected variability for various numbers of depletion passes. We demonstrate the methodology using a data set of Chesapeake Bay blue crab ( Callinectes sapidus ) depletion surveys.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.115
metaresearch head score (Gemma)0.288
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.115
Threshold uncertainty score0.610

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1150.288
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0020.002
Science and technology studies0.0020.001
Scholarly communication0.0010.003
Open science0.0030.002
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.104
GPT teacher head0.331
Teacher spread0.228 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2012
Admission routes1
Has abstractyes

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