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Record W1988316175 · doi:10.1139/b01-130

Expression of borage Δ6 desaturase in <i>Saccharomyces cerevisiae</i> and oilseed crops

2002· article· en· W1988316175 on OpenAlexvenueno aff
Xiao Qiu, Haiping Hong, Nagamani Datla, S. L. MacKenzie, David C. Taylor, Terry L. Thomas

Bibliographic record

VenueCanadian Journal of Botany · 2002
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLipid metabolism and biosynthesis
Canadian institutionsnot available
Fundersnot available
KeywordsSaccharomyces cerevisiaeCytochromeBiologyBiochemistryYeastBrassicaOpen reading frameCytochrome P450EnzymeComplementary DNABotanyPeptide sequenceGene

Abstract

fetched live from OpenAlex

The borage Δ6 desaturase is a modular protein that contains a cytochrome b5-like domain attached to the N-terminus of the main catalytic domain. When the full-length open reading frame was expressed in two types of Saccharomyces cerevisiae strains, the endogenous cytochrome b5-disrupted strain and the cytochrome b5-competent wild type strain, the expressed enzyme introduced a double bond at the Δ6 position into the endogenous substrates 16:1(9) and 18:1(9), and also into the exogenously fed fatty acid substrates 18:2(9,12) and 18:3(9,12,15). However, the preferred substrates of the enzyme when expressed in yeast were 18:2(9,12) and 18:3(9,12,15), whereas 16:1(9) and 18:1(9) were relatively poor substrates. When the partial desaturase sequence with a deletion of the cytochrome b5-like domain at the N-terminus was introduced into the yeast strains, the truncated enzyme could not desaturate any of the supplied substrates. Introduction of the full-length cDNA into flax (Linum usitatissimum L.) under the control of a constitutive (35S) promoter resulted in accumulation of the two Δ6 desaturated fatty acids (18:3(6,9,12) and 18:4(6,9,12,15)), in one elite line, forming up to 22% of the total fatty acids in the stem, 19% in the root, and 11% in the leaf. Introduction of the desaturase into Brassica juncea (L.) Czern. under the control of the Brassica napus L. napin promoter resulted in accumulation of the Δ6 desaturated fatty acids at levels of up to 13% of the total fatty acids in mature seeds.Key words: borage, Δ6 desaturase, γ-linolenic acid, stearidonic acid, Brassica juncea, flax.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.189
Teacher spread0.181 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations46
Published2002
Admission routes1
Has abstractyes

Explore more

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