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Record W1991914646 · doi:10.5539/jfr.v2n4p101

The Plant Extract Collection Kiel in Schleswig-Holstein (PECKISH) Is an Open Access Screening Library

2013· article· en· W1991914646 on OpenAlexvenueno aff
Simone Onur Onur, Heiko Stöckmann, Marion Zenthoefer, Levent Piker, Frank Döring

Bibliographic record

VenueJournal of Food Research · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMedicinal Plants and Bioactive Compounds
Canadian institutionsnot available
FundersBundesministerium für Bildung und Forschung
KeywordsMedicinal plantsBiologyOrnamental plantTraditional medicineBotanyBiotechnologyHorticultureMedicine

Abstract

fetched live from OpenAlex

Because plants and their extracts are a potent resource for bioactive substances we developed the plant extract collection Kiel in Schleswig-Holstein (PECKISH) as an open access screening library. PECKISH contains more than 4500 unique aqueous (about 64%), ethanolic (about 32%), and other (about 4%) extracts from > 880 different plant species and 11 different plant tissues. PECKISH represents about 190 plant families. Extracts were obtained from health shops, outdoor cultivated plants, marine algae, herbs from traditional Chinese medicine, African plants and known medicinal plants. Concentrated and sterilized extracts are stored at -80 °C and are available in a 96-well plate format including empty wells for positive and negative controls. The library format allows medium throughput screenings using enzymatic assays, cell-based assays or phenotypic read-outs using model-organisms such asC. elegans or D. melanogaster. Screenings based on PECKISH are useful to develop dietary supplements, functional foods or drugs. The uniqueness of PECKISH lies in its broad diversity of plant extracts and its open access character.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesOpen science
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.998
Threshold uncertainty score0.208

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0050.005
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0020.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0620.059

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.224
GPT teacher head0.434
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations23
Published2013
Admission routes1
Has abstractyes

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