Stock Origin of Migratory Atlantic Sturgeon in Minas Basin, Inner Bay of Fundy, Canada, Determined by Microsatellite and Mitochondrial DNA Analyses
Bibliographic record
Abstract
Abstract Five distinct population segments of Atlantic sturgeon Acipenser oxyrinchus were recently listed (April 2012) as endangered or threatened under the U.S. Endangered Species Act. Atlantic sturgeon are anadromous, spawning occurs in rivers from the St. Lawrence River, Quebec, to the Satilla River, Georgia, and subadults and adults undertake extensive coastal migrations. Bycatch of Atlantic sturgeon in coastal fisheries may have resulted in the slowed or failed rebuilding of many populations despite the imposition of a U.S. federal moratorium on their harvest in 1998. Canada's Bay of Fundy hosts weir and trawl fisheries which bycatch Atlantic sturgeon of unknown origin. Additionally, tidal power development projects for the Bay of Fundy have been proposed which could detrimentally impact migratory sturgeon. We hypothesized that the Atlantic sturgeon that occur in Minas Basin in the Bay of Fundy are of local Saint John River, New Brunswick, origin with little or no U.S. contribution. We used microsatellite DNA (11 loci) and mitochondrial DNA control region sequence analysis along with previously determined characterizations of nine reference spawning populations to quantify their stock origin. We determined that the summer assemblage of Atlantic sturgeon collected within Minas Basin was of mixed origin, with a greater than 60% contribution from the nearby Saint John River but with a substantial (34–36%) contribution from the Kennebec River, Maine, and a smaller (1–2%) contribution from the Hudson River, New York. There was significant genetic heterogeneity between smaller (<130 cm) and larger individuals (≥130 cm) in Minas Basin; however, the smaller specimens were not exclusively of proximal Saint John River origin. Our results indicate that Atlantic sturgeon of U.S. origin are vulnerable to anthropogenic impacts in the Bay of Fundy, particularly those of Kennebec River origin.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.001 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.001 | 0.001 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".