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Record W1997121066 · doi:10.1118/1.2031018

Sci‐AM Fri ‐ 02: Probing radiation induced cell damage with 31P NMR spectroscopy

2005· article· en· W1997121066 on OpenAlexaff
P. Rapley, C Shewchuk, Christina Richard

Bibliographic record

VenueMedical Physics · 2005
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMetabolomics and Mass Spectrometry Studies
Canadian institutionsLakehead UniversityThunder Bay Regional Health Sciences Centre
Fundersnot available
KeywordsChemistryNuclear magnetic resonance spectroscopyPhosphocholineIrradiationSpectroscopyReproducibilityNuclear magnetic resonanceAnalytical Chemistry (journal)RadiochemistryYield (engineering)Materials sciencePhospholipidChromatographyBiochemistry

Abstract

fetched live from OpenAlex

Nuclear magnetic resonance has the ability to detect changes in tumour, and cell metabolism induced by radiation therapy. This study examined the feasibility of using NMR spectroscopy to quantify metabolic change in response to radiation dose. The metabolites of MCF‐7 cancer cells were extracted using a freeze‐thaw procedure developed for this study, and analyzed by NMR spectroscopy. A reproducibility study was performed consisting of 28 non‐irradiated samples processed from 10 different batch experiments. Peak height ratios relative to inorganic phosphate (Pi) were determined for all phosphorous metabolites present. The intra‐batch standard deviation in peak height ratios was determined to be 1.8%, 7.47%, 3.42%, 2.40%, 2.74%, and 3.21% for phosphoethanolamine, phosphocholine, glycerophosphoethanolamine, glycerophosphocholine, and two unidentified groups of peaks in the high‐energy phosphate range, respectively. In addition, the spectral position (ppm) of Pi was investigated, and found to have intra‐batch standard deviation of 0.014 ppm. The biological response delay time of 48 hrs was determined to yield the greatest metabolic change. Three batch experiments with cells in growth medium where irradiated to 6 Gy, 12 Gy and 0 Gy (control) with a 6 MeV electron linear accelerator beam. Although the sensitivity varied between batches, quantitative analysis of the change (relative to the control) in peak height ratios of the metabolites and Pi spectral shift suggests a significant correlation between dose and metabolic response.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.035

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0100.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.242
Teacher spread0.234 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2005
Admission routes1
Has abstractyes

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