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Record W1999586798 · doi:10.1158/1538-7445.am10-237

Abstract 237: A novel proto-oncogene of TRIM59 characterized in mouse cancer models bridging Ras and pRb signal pathways

2010· article· en· W1999586798 on OpenAlexaffabout
Jim W. Xuan

Bibliographic record

VenueCancer Research · 2010
Typearticle
Languageen
FieldImmunology and Microbiology
Topicinterferon and immune responses
Canadian institutionsWestern University
Fundersnot available
KeywordsOncogeneCarcinogenesisCancerBiologyCancer researchCell cycleGenetics

Abstract

fetched live from OpenAlex

Abstract Fatma Valiyeva 1, Haixing Xuan1, Fei Jiang 1, Ahmed Elmaadawi1, Siu-Pok Yee1, Madeleine Moussa1, Leda Raptis 2, Jonathan I. Izawa1, Burton B. Yang 3, Norman M. Greenberg 4, Fen Wang 5, Jim W. Xuan*1 1Lawson Heath Research Institute, University of Western Ontario, London, Ontario, Canada; 2 Queen's University, Kingston, Ontario, Canada, 3Sunnybrook Research Institute, Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; 4Clinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA, 5 Institute of Biosciences and Technology, Texas A&M University System Health Science Center, Houston, TX, USA Understanding the signal pathway network associated with Ras functions including novel effectors is critical for molecular targeted therapy, since just mutations of Ras oncogene lead to approximately 30% of all human cancers. Here we show that a novel member of the TRIM family, TRIM59, is a proto-oncogene which belongs to a new pathway linking Ras oncogene and pRB tumor suppressor. The TRIM59 gene was characterized to be up-regulated correlating with SV40Tag initiated tumorigenesis in mouse prostate cancer (CaP) models, as well as in human carcinoma. As a signal pathway effector, we identified two phosphor-forms of TRIM59 (p53 and p55), which correlated with the phosphorylation sites of Ser/Thr and Tyr as characterized in purified TRIM59 proteins in tumor samples from knock-in, and transgenic mice at different tumor stages with wild-type mice and NIH3T3 cells as controls. ELISA quantitative measurements demonstrated that the p-Tyr-TRIM59 protein correlates with advanced CaP, while p- Ser/Thr TRIM59 correlates with tumorigenesis. The function of TRIM59 was identified by shRNA knockdown in human CaP DU145 cells resulted in S-phase and cell growth retardation. Since a “hit-and-run” effect of shRNA knockdown was found only in 24 hours after transfection, differential cDNAmicroarrray was performed to identify unique signals from those of stable transfectants, which demonstrated that knockdown of TRIM59 may target the Ras signal pathway. To test the TRIM59 function as a proto-oncogene, a transgenic mouse model was established by utilizing a prostate-specific gene (PSP94) to direct up-regulation of the TRIM59 gene. In PSP94-TRIM59 mice, TRIM59 gene expression in the prostate revealed a full potential, as with SV40Tag, in inducing tumorigenesis from PIN (prostate intraductal neoplasia), from well to poorly differentiated AI (androgen independent)-NE (neuroendocrine) CaP, which coincided with the up-regulation of genes specific to the Ras signal pathway. Genes linking Ras and pRB signal pathways were identified and confirmed in tg-TRIM59 model. The finding of a novel proto-oncogene will implicate a novel strategy for diagnosis, prognosis and therapy of cancer. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 101st Annual Meeting of the American Association for Cancer Research; 2010 Apr 17-21; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2010;70(8 Suppl):Abstract nr 237.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.097
GPT teacher head0.365
Teacher spread0.269 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2010
Admission routes2
Has abstractyes

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