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Record W2000481861 · doi:10.1017/s0952523807070216

Degradation of the non-palmitoylated invertebrate visual guanine-nucleotide binding protein, iG<sub>q</sub>α(C3,4A), by the ubiquitin-proteasomal pathway is regulated by its activation and translocation to the cytoplasm

2007· article· en· W2000481861 on OpenAlexafffund
Lynle Go, Jane Mitchell

Bibliographic record

VenueVisual Neuroscience · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRetinal Development and Disorders
Canadian institutionsUniversity of Toronto
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsHEK 293 cellsCytosolPalmitoylationCytoplasmBiologyMolecular biologyBiochemistryUbiquitinCell biologyChemistryReceptorEnzymeCysteineGene

Abstract

fetched live from OpenAlex

Light-dependent translocation of invertebrate visual guanine-nucleotide binding protein, iGq alpha, from rhabdomeric membranes to the cytoplasm is one of many mechanisms that contribute to light adaptation in the invertebrate eye. We have previously cloned iGq alpha from a Loligo pealei photoreceptor cDNA library and shown that when expressed in HEK 293T cells it is palmitoylated. In this study we compared the activation, cytoplasmic translocation, and turnover of iGq alpha with that of a non-palmitoylated mutant, iGq alpha(C3,4A). In the HEK 293T cells, muscarinic M1 receptors coupled equally well to iGq alpha and iGq alpha(C3,4A) to activate phospholipase C. Activation of iGq alpha(C3,4A), but not iGq alpha, induced translocation of the alpha subunit from the membrane to cytosol with rapid degradation of the soluble protein resulting in a decreased half-life for iGq alpha(C3,4A) of 10 hours compared to 20 hours for iGq alpha. Degradation of iGq alpha(C3,4A) was inhibited by proteasomal inhibitors but not by inhibitors of lysosomal proteases or calpain. The presence of the proteasomal inhibitor led to the accumulation of polyubiquitinated species of either iGq alpha or iGq alpha(C3,4A). Our results suggest that palmitoylation of iGq alpha is required to maintain membrane association of the protein in its active conformation, and whereas membrane-bound and soluble iGq alpha can be polyubiquitinated, membrane association protects the protein from rapid degradation by the proteasomal pathway.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.240
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes2
Has abstractyes

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