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Record W2001299805 · doi:10.1186/1897-4287-3-2-59

The 3020insC Allele of NOD2 Predisposes to Cancers of Multiple Organs

2005· article· en· W2001299805 on OpenAlexaff
Jan Lubiński, Tomasz Huzarski, Grzegorz Kurzawski, Janina Suchy, Bartłomiej Masojć, Marek Mierzejewski, Marcin Lener, W Domagała, Maria Chosia, Urszula Teodorczyk, Krzysztof Mędrek, Tadeusz Dębniak, Elżbieta Złowocka, Jacek Gronwald, Tomasz Byrski, Ewa Grabowska, Katarzyna Nej, Anna Szymańska, Jolanta Szymańska-Pasternak, Joanna Matyjasik, Cezary Cybulski, Anna Jakubowska, Bohdan Górski, Steven A. Narod

Bibliographic record

VenueHereditary Cancer in Clinical Practice · 2005
Typearticle
Languageen
FieldMedicine
TopicHelicobacter pylori-related gastroenterology studies
Canadian institutionsCoalition for Research in Women's HealthUniversity of Toronto
FundersUniwersytet WarszawskiWarszawski Uniwersytet Medyczny
KeywordsMedicineColorectal cancerAlleleNOD2CancerBreast cancerInternal medicineLung cancerOvarian cancerOncologyDiseaseGastroenterologyCrohn's diseaseGeneGeneticsBiology

Abstract

fetched live from OpenAlex

The NOD2 gene has been associated with susceptibility to Crohn's disease and individuals with Crohn's disease are at increased risk for cancer at a number of organ sites. We studied the association between the 3020insC allele of the NOD2 gene and cancer among 2604 cancer patients and 1910 controls from Poland. Patients were diagnosed with one of twelve types of cancer in the Szczecin region between 1994 and 2004. Significant associations were found for colon cancer (OR = 1.8; 95% CI 1.2 to 2.6), for lung cancer (OR = 1.7; 95% CI = 1.1 to 2.5) and for ovarian cancer (OR = 1.6; 95% CI 1.1 to 2.3). In addition, a significant association was found for early-onset laryngeal cancer (OR = 2.9; 95% CI 1.4 to 6.2) and for breast cancer in the presence of DCIS (OR = 2.1 95% CI = 1.2 to 3.6). The NOD2 3020insC allele is relatively common (in Poland 7.3% of individuals) and may be responsible for an important fraction of cancer cases. We estimate that the lifetime cancer risk among carriers of this allele is 30% higher than that of individuals with two wild-type alleles.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.011
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.239
Threshold uncertainty score0.997

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.011
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.051
GPT teacher head0.406
Teacher spread0.355 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations31
Published2005
Admission routes1
Has abstractyes

Explore more

Same venueHereditary Cancer in Clinical PracticeSame topicHelicobacter pylori-related gastroenterology studiesFrench-language works237,207