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Record W2003081161 · doi:10.1021/cg060167p

Linking Hydrogen Dicarboxylate Synthons with Substituted Guanidinium Cations:  Transforming Rings and Chains into Two- and Three-Dimensional Structures

2006· article· en· W2003081161 on OpenAlexaff
Farouq F. Said, Tiow‐Gan Ong, P. Bazinet, Glenn P. A. Yap, D.S. Richeson

Bibliographic record

VenueCrystal Growth & Design · 2006
Typearticle
Languageen
FieldChemistry
TopicCrystallography and molecular interactions
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsChemistryHydrogen bondSynthonCrystallographyCarboxylateHydrogenMalonateOxalic acidMoleculeDeprotonationMaleic acidIntramolecular forceStereochemistryIonInorganic chemistryOrganic chemistry

Abstract

fetched live from OpenAlex

Hydrogen-bonding interactions between N,N ‘, N ‘ ‘-trisubstituted guanidinium cations and hydrogen dicarboxylates are explored. The extended structures of these compounds combine established structural motifs for the hydrogen carboxylate anions with C 3 -symmetric guanidinium links. Both N,N ‘, N ‘ ‘-triisopropylguanidine (TPG) and N,N ‘ -diisopropyl- N ‘ ‘-pentafluorophenylguanidine (DPArG) react in 1:1 stoichiometry with oxalic acid to yield compounds that were crystallized from tetrahydrofuran (THF) to give (TPGH)(C 2 O 4 H)(THF) 0.5 ( 1 ) and (DPArGH)C 2 O 4 H(THF) ( 2 ). Compound 1 displayed hydrogen oxalate dimers ( (10) motif) that are bridged with the TPGH + cation to yield an open three-dimensional (3-D) structure that crystallized around occluded THF. In the case of compound 2, the targeted (DPArGH)(C 2 O 4 H) incorporated an additional hydrogen-bonded THF molecule to provide a structure in which the - O 2 CCOOH anion exhibited head-to-tail chains (C(5) motif) that are cross-linked through hydrogen bonds with [(DPArGH)(THF)] + to yield two-dimensional (2-D) layers that stack along the c -axis. TPG also reacts stoichiometrically with succinic (butanedioic) acid and maleic ( cis -2-butenedioic) acid to produce guanidinium hydrogen dicarboxylate salts (TPGH + )( - O 2 CC 2 H 4 CO 2 H) ( 3 ) and (TPGH + )( - O 2 CCH CHCO 2 H) ( 4 ). The primary structure of 3 combines head-to-tail hydrogen-bonded chains of monoanionic dicarboxylic acids with chain-spanning planar TPGH + cations to give a cross-linked ladder motif that ultimately generates a 3-D net. In the case of 4, the hydrogen maleate anion displayed a characteristic intramolecular, low barrier hydrogen bond (LBHB) (S(7) motif). Hydrogen bonding between planar TPGH + and the cyclic, planar anion leads to a layered solid-state structure consisting of a corrugated 2-D net constructed from 16- and 42-membered rings.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.068
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.213
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations11
Published2006
Admission routes1
Has abstractyes

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