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Record W2003653985 · doi:10.1577/t05-055.1

Evaluation of the Native Status of Sea Lampreys in Lake Champlain Based on Mitochondrial DNA Sequencing Analysis

2006· article· en· W2003653985 on OpenAlexaboutno aff
John R. Waldman, Cheryl Grunwald, Isaac Wirgin

Bibliographic record

VenueTransactions of the American Fisheries Society · 2006
Typearticle
Languageen
FieldEnvironmental Science
TopicFish Ecology and Management Studies
Canadian institutionsnot available
FundersNational Institute of Environmental Health SciencesResearch Foundation for the State University of New YorkNational Oceanic and Atmospheric AdministrationNational Institutes of Health
KeywordsPetromyzonLampreyFisheryTributaryEcologyAbundance (ecology)Mitochondrial DNAGeographyWatershedPopulationBiology

Abstract

fetched live from OpenAlex

Abstract Adult sea lampreys Petromyzon marinus parasitize a variety of recreationally, commercially, and ecologically important fishes in the north temperate Atlantic Ocean and some inland waters of North America, including the Great Lakes and Lake Champlain. This has resulted in the development of international, provincial, and state programs to suppress their abundance in some of these waters. This effort, in part, emanates from the nonnative status afforded sea lampreys in these lakes by management agencies. However, whether the sea lamprey is native to Lake Champlain has long been debated, and the outcome of this debate may impact the intensity of efforts to suppress their abundance there. We addressed this issue by using sequence analysis of the mitochondrial DNA control region. Resultant haplotype frequencies of sea lampreys from the Lake Champlain watershed were compared among sea lamprey collections made in multiple drainages within the Lake Ontario and Lake Superior watersheds and Atlantic coast rivers. We found no evidence of population structuring among tributaries within any of these four systems, but we did find highly significant genetic differentiation between systems. Haplotype diversity was low in the collections from the two Great Lakes and even more so in those from Lake Champlain compared with that in Atlantic coast rivers. Our genetic results are most consistent with the hypothesis that sea lampreys are native to Lake Champlain, having colonized the lake postglacially by one of several zoogeographic corridors.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.899
Threshold uncertainty score0.201

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.236
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations29
Published2006
Admission routes1
Has abstractyes

Explore more

Same venueTransactions of the American Fisheries SocietySame topicFish Ecology and Management StudiesFrench-language works237,207