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Record W2011505481 · doi:10.1109/nems.2010.5592191

The effects of nanoparticles on polymerase chain reaction

2010· article· en· W2011505481 on OpenAlexafffund
John T. W. Yeow, Weijie Wan

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMaterials Science
TopicNanoparticles: synthesis and applications
Canadian institutionsUniversity of Waterloo
FundersUniversity of Waterloo
KeywordsNanomaterialsNanoparticleColloidal goldNanotechnologyPolymeraseReagentChemistryPolymerase chain reactionTitanium dioxideTaq polymeraseSilver nanoparticleMaterials scienceDNABiochemistryOrganic chemistry

Abstract

fetched live from OpenAlex

The ability of synthesizing nanomaterials marked the beginning of the Nanotechnology era. Due to their extremely small sizes, nanomaterials present unique properties that are not seen in their bulk counterparts. However, understanding how nanomaterials behave in all kinds of biochemical reactions is the key to utilize them in potential applications. In this paper, the effects of gold, titanium dioxide and silver nanoparticles on polymerase chain reaction (PCR) are reported. It is found that they all cause PCR inhibition. Surface interaction between nanoparticles and PCR components such as Taq polymerase should account for the inhibition. PCR inhibition caused by gold nanoparticles can be reversed by adding chemical reagents to block surface of the nanoparticles from interacting with Taq polymerase. Surface modification of nanoparticles has a large impact on PCR. Titanium dioxide nanoparticles modified with different functional groups show different PCR inhibition behavior. It is also found that mixing titanium dioxide nanoparticles with silver nanoparticles at a certain ratio can reduce PCR inhibition caused by both nanoparticles.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.230
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2010
Admission routes2
Has abstractyes

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