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Record W2012874400 · doi:10.1351/pac200375112263

Deformed frogs and environmental retinoids

2003· article· en· W2012874400 on OpenAlexaboutno aff
David M. Gardiner, Aristocle Ndayibagira, Felix Grün, Bruce Blumberg

Bibliographic record

VenuePure and Applied Chemistry · 2003
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAdvanced biosensing and bioanalysis techniques
Canadian institutionsnot available
Fundersnot available
KeywordsRetinoidMechanism (biology)ZoologyChemistryBiologyEcologyRetinoic acidBiochemistry

Abstract

fetched live from OpenAlex

Since the early 1990s, a substantial number of deformed frogs have been observed in North America, particularly in the upper Midwest and Canada. Attempts to understand the etiology of the deformed frog problem have met with limited success to date with nearly as many proposed explanations as research groups working on the problem. Models for the mechanism underlying the development of deformed frogs include parasite/predation, ultraviolet radiation, and chemical exposure. Each model has its strengths and weaknesses. Despite contentious debate among researchers, there is an overall consensus that the increasing prevalence of deformed frogs is the result of a water-borne contaminant that has recently appeared, or reached a critical concentration. Our detailed analysis of malformed frogs collected in Minnesota ponds and lakes suggested that limb patterning was being modified by the disruption of a retinoid-sensitive developmental signaling pathway. Accordingly, we focused in the identification and characterization of bioactive retinoids from lake water and showed that retinoid treatment of frog embryos at sensitive times of development could recapitulate the full spectrum of limb abnormalities observed in field specimens in the laboratory. These data have led to the conclusion that inappropriate modulation of retinoid signaling by environmental contaminants is the mechanism underlying the increased incidence of frog malformations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.003
GPT teacher head0.196
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations64
Published2003
Admission routes1
Has abstractyes

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