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Record W2019949273 · doi:10.1021/ja0715905

A Molecular Thermometer Based on Fluorescent Protein Blinking

2007· article· en· W2019949273 on OpenAlexafffund
Felix H. C. Wong, Daniel S. Banks, Asmahan Abu‐Arish, Cécile Fradin

Bibliographic record

VenueJournal of the American Chemical Society · 2007
Typearticle
Languageen
FieldChemistry
Topicthermodynamics and calorimetric analyses
Canadian institutionsMcMaster University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsChemistryMicrofluidicsMiniaturizationLaser power scalingFluorescenceLaserAnalytical Chemistry (journal)ThermometerFluorescence correlation spectroscopyLaser-induced fluorescenceBiological systemNanotechnologyMoleculeThermodynamicsChromatographyOpticsOrganic chemistryMaterials science

Abstract

fetched live from OpenAlex

With the present trend toward a miniaturization of chemical systems comes the need for a precise characterization of physicochemical parameters in very small fluid volumes. We describe here an original approach for small-scale temperature measurements based on the detection of fluorescent protein blinking. We observed that the characteristic time associated with the reversible protonation reaction responsible for the blinking of the enhanced green fluorescent protein is strongly temperature dependent at low pH. The blinking characteristic time can easily be detected by fluorescence correlation spectroscopy, and therefore provides the means for noninvasive, spatially resolved, absolute temperature measurements. We applied this approach to the quantification of laser-heating effects in thin liquid samples. As expected, we observed a linear dependence between the temperature increase at the laser focus and both the laser power and the sample extinction coefficient. In addition, we were able to measure the laser induced temperature increase at the glass/liquid interface, a value difficult to predict and hard to access experimentally, demonstrating the usefulness of our approach to study surface effects in microfluidic chips. The use of GFP derivatives as genetically encoded molecular thermometers should have direct applications for both microfluidics and single-cell calorimetry.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.246
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations70
Published2007
Admission routes2
Has abstractyes

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