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Generalized estimating equations and generalized linear mixed‐effects models for modelling resource selection

2009· article· en· W2020301958 on OpenAlexafffundabout
Nicola Koper, Micheline Manseau

Bibliographic record

VenueJournal of Applied Ecology · 2009
Typearticle
Languageen
FieldEnvironmental Science
TopicWildlife Ecology and Conservation
Canadian institutionsParks CanadaUniversity of Manitoba
FundersRussian Science FoundationParks Canada
KeywordsGeneralized linear mixed modelGeneralized linear modelStatisticsGeneralized estimating equationMathematicsSelection (genetic algorithm)Model selectionPopulationSampling (signal processing)Generalized additive modelEconometricsMixed modelComputer scienceMachine learning

Abstract

fetched live from OpenAlex

Summary Accurate resource selection functions (RSFs) are important for managing animal populations. Developing RSFs using data from GPS telemetry can be problematic due to serial autocorrelation, but modern analytical techniques can help to compensate for this correlation. We used telemetry locations from 18 woodland caribou Rangifer tarandus caribou in Saskatchewan, Canada, to compare marginal (population‐specific) generalized estimating equations (GEEs), and conditional (subject‐specific) generalized linear mixed‐effects models (GLMMs), for developing resource selection functions at two spatial scales. We evaluated the use of empirical standard errors, which are robust to misspecification of the correlation structure. We compared these approaches with destructive sampling. Statistical significance was strongly influenced by the use of empirical vs. model‐based standard errors, and marginal (GEE) and conditional (GLMM) results differed. Destructive sampling reduced apparent habitat selection. k ‐fold cross‐validation results differed for GEE and GLMM, as it must be applied differently for each model. Synthesis and applications . Due to their different interpretations, marginal models (e.g. generalized estimating equations, GEEs) may be better for landscape and population management, while conditional models (e.g. generalized linear mixed‐effects models, GLMMs) may be better for management of endangered species and individuals. Destructive sampling may lead to inaccurate resource selection functions (RSFs), but GEEs and GLMMs can be used for developing RSFs when used with empirical standard errors.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.118
Threshold uncertainty score0.421

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.243
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations133
Published2009
Admission routes3
Has abstractyes

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