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Biospecific Affinity Chromatography: Computational Modelling via Lattice Boltzmann Method and Influence of Lattice-Based Dimensionless Parameters

2015· article· en· W2025028931 on OpenAlexvenueno aff
José Antônio Rabi, Dayane Cristina Gomes Okiyama, Eliana Setsuko Kamimura

Bibliographic record

VenueInternational Journal of Biotechnology for Wellness Industries · 2015
Typearticle
Languageen
FieldEngineering
TopicLattice Boltzmann Simulation Studies
Canadian institutionsnot available
FundersFundação de Amparo à Pesquisa do Estado de São Paulo
KeywordsDimensionless quantityLattice Boltzmann methodsLattice (music)Affinity chromatographyStatistical physicsMaterials scienceChromatographyChemistryPhysicsMechanicsNuclear magnetic resonance

Abstract

fetched live from OpenAlex

Based on a dynamic (i.e. time-dependent) one-dimensional approach, this work applied lattice Boltzmann method (LBM) to computationally model biospecific affinity chromatography (BAC). With governing equations expressed in lattice-based dimensionless form, LBM was implemented in D1Q2 lattice by assigning particle distribution functions to adsorbate concentration in both fluid and solid phases. The LBM simulator was firstly tested in view of a classic BAC work on lysozyme and the streaming step relating to adsorbate concentration in the solid-phase was suppressed from the LBM code with no loss of functionality. Expected behaviour of breakthrough curves was numerically reproduced and the influence of lattice-based dimensionless parameters was examined. The LBM simulator was next applied so as to assess lattice-based dimensionless parameters regarding an experimental BAC work on lipase.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.347
Threshold uncertainty score0.812

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.042
GPT teacher head0.290
Teacher spread0.247 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2015
Admission routes1
Has abstractyes

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