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Record W2027635134 · doi:10.2135/cropsci2011.01.0016

Assessing the Representativeness and Repeatability of Test Locations for Genotype Evaluation

2011· article· en· W2027635134 on OpenAlexaffabout
Weikai Yan, Denis Pageau, Judith Fregeau-reid, Julie Durand

Bibliographic record

VenueCrop Science · 2011
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicGenetics and Plant Breeding
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsRepresentativeness heuristicRepeatabilityBiplotBiologySelection (genetic algorithm)GenotypeGene–environment interactionStatisticsAdaptation (eye)BiotechnologyComputer scienceGeneticsMathematicsMachine learning

Abstract

fetched live from OpenAlex

ABSTRACT The success of a plant breeding program depends on many factors; one crucial factor is the selection of suitable breeding and testing locations. A test location must be discriminating so that genetic differences among genotypes can be easily observed, it must be representative of the target environments so that selected genotypes have the desired adaptation, and its representation of the target environment should also be repeatable so that genotypes selected in 1 yr will have superior performance in future years. Using the yield data of 2006 through 2010 Quebec Oat Registration and Recommendation Trials as an example, we presented a method to visualize the representativeness and repeatability of test locations based on a genotype main effect plus genotype × environment interaction (GGE) biplot. The repeatability of a test location could also be quantified by mean genetic correlations between years within the location. Based on representativeness and repeatability, four categories of test locations were classified and their usefulness in plant breeding discussed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.017
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.036

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0070.017
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0030.002
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.235
GPT teacher head0.354
Teacher spread0.119 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations100
Published2011
Admission routes2
Has abstractyes

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