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Record W2027909421 · doi:10.1086/676912

A geometric morphometric approach to establish body-shape trait criteria for aquatic insects

2014· article· en· W2027909421 on OpenAlexafffund
Jessica M. Orlofske, Donald J. Baird

Bibliographic record

VenueFreshwater Science · 2014
Typearticle
Languageen
FieldMathematics
TopicMorphological variations and asymmetry
Canadian institutionsEnvironment and Climate Change CanadaUniversity of New Brunswick
FundersNatural Sciences and Engineering Research Council of CanadaUniversity of Chicago
KeywordsBody shapeOdonataTraitBody planAquatic insectTaxonBiologyEcologyHabitatMorphometricsShape analysis (program analysis)Artificial intelligenceComputer science

Abstract

fetched live from OpenAlex

Body shapes of aquatic insect larvae reflect phenotypic responses to complex environmental conditions and can be used to infer habitat properties and indicate natural and anthropogenic perturbations in river ecosystems. Investigation of relationships between body shape and physical-habitat characteristics has been restricted by a lack of an objective schema for quantitative characterization of body-shape variation. We present a functional ecological framework for body-shape classification based on defined criteria. We applied a geometric morphometric (GM) approach to the general classification of body shape in 4 morphologically diverse orders, Ephemeroptera (E), Plecoptera (P), Trichoptera (T), and Odonata (O) collected from 3 sites with contrasting hydrological and hydraulic characteristics. We describe a robust classification of body shapes for E, P, and O, which possess a compartmentalized body plan, and suggest a preliminary classification for T. We compared GM body shapes with body-shape trait states available in trait databases and found discordance between the 2 classifications. We explored the value of GM body shapes to describe taxon shape structure of reference sites and to detect variation reflecting physical properties of the sites. GM body-shape classes can augment the trait states already available and enhance inference regarding habitat status. Patterns in the shape strategies of aquatic insects, particularly EPO taxa, can be used to extrapolate shape information for other taxonomic groups. GM provides a stable shape classification that can contribute to the description of different ecological strategies of aquatic insects. Expanding the scope of shape information available for many taxonomic groups can improve our understanding of how organism phenotype relates to environmental conditions and supports traits-based assessment.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.006
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.004
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0060.004
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.067
GPT teacher head0.307
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations22
Published2014
Admission routes2
Has abstractyes

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