MétaCan
Menu
Back to cohort
Record W2030502172 · doi:10.1139/b00-140

Detecting exodermal Casparian bands in vivo and fluid-phase endocytosis in onion (<i>Allium</i> <i>cepa</i> L.) roots

2001· article· en· W2030502172 on OpenAlexvenueno aff
Ewa Cholewa, Carol A. Peterson

Bibliographic record

VenueCanadian Journal of Botany · 2001
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Reproductive Biology
Canadian institutionsnot available
FundersSveriges Lantbruksuniversitet
KeywordsApoplastBiophysicsEndocytosisChemistryVacuoleCell wallEndodermisBotanyCytoplasmBiochemistryBiologyCell

Abstract

fetched live from OpenAlex

Maturation of the exodermis involves development of a Casparian band, a structure that blocks the apoplastic movement of ions. The position at which this band is formed is not readily predictable, since it depends on species and growing conditions. Until now, Casparian band detection necessitated destructive methods which involved sectioning or clearing the roots. In the present study, a method for detecting exodermal Casparian bands in vivo is presented. Undisturbed onion roots were incubated for 2 h in 0.1% 8-hydroxy-1,3,6-pyrenetrisulphonate (PTS) and then thoroughly rinsed in running water. Under UV light, the tracer was evident in the cortex of the root regions with an immature exodermis but not in older regions of the root where the Casparian band had developed. PTS had entered the protoplasts of the cortical cells in the younger part of the root and had not been removed by rinsing. The first order kinetics of uptake, and insensitivity to external pH and probenecid indicated that PTS entered the cell by fluid-phase endocytosis. PTS-loaded vesicles that released their contents into the vacuole were seen using confocal laser scanning microscopy. When applied to undisturbed, whole root systems, PTS was not detected in aqueous extracts of the leaves. Thus, there is no major apoplastic bypass in healthy onion roots.Key words: exodermis, Casparian bands, apoplastic bypass, PTS, fluid-phase endocytosis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.247
Threshold uncertainty score0.797

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.238
Teacher spread0.228 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2001
Admission routes1
Has abstractyes

Explore more

Same venueCanadian Journal of BotanySame topicPlant Reproductive BiologyFrench-language works237,207