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Record W2033630075 · doi:10.2135/cropsci2008.09.0533

Genotype × Environment Interaction and Stability for Isoflavone Content in Soybean

2009· article· en· W2033630075 on OpenAlexafffundabout
Sheila E. Murphy, Elizabeth A. Lee, L. Woodrow, Philippe Séguin, Jagdish Kumar, Istvan Rajcan, G. R. Ablett

Bibliographic record

VenueCrop Science · 2009
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSoybean genetics and cultivation
Canadian institutionsMcGill UniversityAgriculture and Agri-Food CanadaUniversity of Guelph
FundersOntario Ministry of Agriculture, Food and Rural Affairs
KeywordsBiplotBiologyGenotypeGene–environment interactionIsoflavonesTraitQuantitative trait locusAgronomyPopulationAnimal scienceFood scienceBiotechnologyGeneticsGeneBiochemistry

Abstract

fetched live from OpenAlex

Isoflavones are naturally occurring compounds found in soybean [Glycine max (L.) Merr.]. Soybean isoflavone, as a quantitative trait, is subject to significant genotype × environment interaction, which makes breeding for this trait difficult. Thirty F4:7 soybean lines, derived from crosses of ‘RCAT Angora’ × CK‐01 and ‘Heinong 35’ × RCAT Angora were classified within each population as high, intermediate, or low isoflavone. The lines, parents, and two maturity checks were grown in four locations in 2005 and six locations in 2006 across Ontario and Quebec, Canada. Isoflavone content of the mature seed was determined by near‐infrared reflectance. The effects of genotype, environment, and the genotype × environment (G × E) interaction were significant. Consistently performing genotypes from the two populations were identified by several stability parameters. Genotype–genotype × environment (GGE) biplot demonstrated an ability to provide information on both the genotypes and the environments in which they were evaluated. The identification of genotypes with consistent placement in either the high‐ and low‐isoflavone classes suggested that breeding for relative isoflavone content in soybean is possible, although breeding for absolute stability remains a challenge, given the large environmental influence on soybean isoflavone levels.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.031
Threshold uncertainty score0.062

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.061
GPT teacher head0.247
Teacher spread0.187 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations64
Published2009
Admission routes3
Has abstractyes

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