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Record W2034641761 · doi:10.1139/b09-065

The genus <i>Bauhinia</i> s.l. (Leguminosae): a phylogeny based on the plastid <i>trn</i>L–<i>trn</i>F region

2009· article· en· W2034641761 on OpenAlexafffundvenue
Carole Sinou, Félix Forest, Gwilym P. Lewis, Anne Bruneau

Bibliographic record

VenueBotany · 2009
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Diversity and Evolution
Canadian institutionsUniversité de Montréal
FundersNatural Sciences and Engineering Research Council of CanadaMinisterstvo Školství, Mládeže a TělovýchovyUniversité de MontréalNational Science Foundation
KeywordsBiologyParaphylyPantropicalMonophylyBauhiniaGenusSubgenusBotanySister groupZoologyCladePhylogenetics

Abstract

fetched live from OpenAlex

As the largest genus in tribe Cercideae, the pantropical genus Bauhinia has been the subject of a number of regional treatments in which it has been recognized either as a single genus with several subgenera or as several distinct genera. With the aim to better understand the taxon relationships within Bauhinia and between it and related genera, we have sequenced the plastid trnL–trnF region for 85 species, which together are representative of the eight genera recognized within Bauhinia sensu lato by some workers. In addition, representative taxa were verified for the presence or absence of the plastid rpl2 intron, which previous studies indicated might be a marker for specific lineages within Bauhinia s.l. Both Bayesian and parsimony analyses indicate that Bauhinia s.l. is paraphyletic with the monospecific genus Brenierea clustered within it. This genus, usually described as sister to Bauhinia s.l., forms a clade with the genera Piliostigma and Bauhinia sensu stricto. The remaining genera ( Gigasiphon , Tylosema , Barklya , Phanera , Lasiobema , and Lysiphyllum ) form a second clade sister to the first. All of these segregate genera are monophyletic except for Phanera, which is divided into two lineages comprising the Asian Phanera species together with the genus Lasiobema , and the second comprising the American Phanera species. The relationship between the Brenierea – Bauhinia s. str. – Piliostigma clade, the Gigasiphon–Tylosema–Barklya–Phanera–Lasiobema–Lysiphyllum clade and the genus Griffonia is not well resolved, but Adenolobus is sister to this large monophyletic group and the genus Cercis is sister to all other Cercideae. Preliminary analyses of the rpl2 plastid region also support the Piliostigma – Brenierea – Bauhinia s. str. clade, suggesting a unique loss event of the intron prior to the diversification of this clade.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.178
Teacher spread0.161 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations92
Published2009
Admission routes3
Has abstractyes

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