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Cancer Risk Factors in SLE: Multivariate Regression Analysis in 16,409 Patients

2014· article· en· W2035987605 on OpenAlexaff
Sasha Bernatsky, Rosalind Ramsey‐Goldman, Jean-François Jean-François, Lawrence Joseph, Michelle Petri, Asad Zoma, Susan Manzi, Murray B. Urowitz, Dafna D. Gladman, Paul R. Fortin, Ellen M. Ginzler, Edward Yelin, Sang‐Cheol Bae, Daniel J. Wallace, Steven M. Edworthy, Søren Jacobsen, Caroline Gordon, Mary Anne Dooley, Christine Peschken, John G. Hanly, Graciela S. Alarcón, Ola Nived, Guillermo Ruiz‐Irastorza, David Isenberg, Anisur Rahman, Torsten Witte, Cynthia Aranow, Diane L. Kamen, Kristján Steinsson, Anca Askanase, Susan G. Barr, Lindsey A. Criswell, Gunnar Sturfelt, Neha M. Patel, Jean‐Luc Senécal, Michel Zummer, Janet Pope, Stephanie Ensworth, Hani El‐Gabalawy, Timothy J. McCarthy, Lene Dreyer, Jeremy A. Labrecque, Yvan St. Pierre, John Sibley, Ann E. Clarke

Bibliographic record

VenueJournal of Autoimmune Diseases and Rheumatology · 2014
Typearticle
Languageen
FieldMedicine
TopicSystemic Lupus Erythematosus Research
Canadian institutionsRoyal University HospitalUniversity of British ColumbiaWestern UniversityDalhousie UniversityUniversité de MontréalUniversité LavalUniversity of ManitobaToronto Western HospitalMcGill UniversityUniversity of CalgaryMcGill University Health Centre
Fundersnot available
KeywordsMultivariate statisticsCancerMultivariate analysisRegressionRegression analysisMedicineBayesian multivariate linear regressionInternal medicineOncologyStatisticsMathematics

Abstract

fetched live from OpenAlex

Background : We assessed factors associated with cancer risk in systemic lupus erythematosus (SLE), relative to the general population, using a large international multi-centre clinical cohort (30 centres, 16,409 patients). Methods : Cancers were ascertained by registry linkage. We used Poisson hierarchical regression to assess for potential independent effects of sex, race/ethnicity, age group, SLE duration, and calendar-year period on the standardized incidence ratios (SIR; ratio of cancers observed to expected). The hierarchical model allowed for differences in effects across countries. The primary regression analyses were done using the overall cancer SIRs; in secondary analyses we focused on hematological cancer SIRs. Results : In adjusted analyses, we demonstrated lower SIR estimates for overall cancer risk, in black versus white SLE patients, in SLE patients of older versus younger age, and for patients with SLE duration of 5 years or more (versus lower duration). Female sex and calendar year were not clearly associated. Regarding hematological cancers specifically, SLE duration of 5 years or more again appeared to be associated with lower SIR estimates. Conclusion : Cancer risk in SLE is increased relative to the general population; this is particularly true for patients of white race/ethnicity, younger age, and of shorter SLE duration.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.021

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.005
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0010.002
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.302
Teacher spread0.292 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2014
Admission routes1
Has abstractyes

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