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Record W2038998968 · doi:10.1158/1538-7445.am2012-4515

Abstract 4515: Low serum levels of a novel anti-inflammatory fatty acid as a new risk factor for colorectal cancer

2012· article· en· W2038998968 on OpenAlexaff
Shawn Ritchie, Jon Tonita, Riaz Alvi, Denis C. Lehotay, Hoda Elshoni, James D. McHattie, Dayan B. Goodenowe

Bibliographic record

VenueCancer Research · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer, Lipids, and Metabolism
Canadian institutionsRegina Qu'Appelle Health RegionUniversity of SaskatchewanSaskatchewan Disease Control LaboratorySaskatchewan Cancer AgencyPhenomenome Discoveries (Canada)
Fundersnot available
KeywordsColonoscopyMedicineColorectal cancerGastroenterologyInternal medicineIncidence (geometry)PopulationRisk factorPercentileCancer

Abstract

fetched live from OpenAlex

Abstract Low serum levels of novel, long-chain, hydroxylated and polyunsaturated fatty acids (GTAs) in colorectal cancer (CRC) patients has been previously reported. This study prospectively investigated the relationship between serum GTA levels and CRC incidence among subjects undergoing colonoscopy. Serum samples and pathology data were collected from 4923 representative subjects undergoing colonoscopy in a typical, non-screening, colonoscopy population and from 964 representative age and geographically-matched subjects from the general population. Serum GTA-446 levels were determined on all subjects using a sensitive tandem mass spectrometric method. A low serum GTA-446 level was defined as a GTA-446 concentration below the tenth percentile of 40-49 year-olds in the general population sampling. Eighty-six percent of newly diagnosed CRC subjects (87% for stage 0-II and 85% for stage III-IV) were observed to have low serum GTA-446 levels, with a PPV of 15% and NPV of 99.7%. CRC incidence was observed to increase significantly with age in all subjects (p<0.05) and in low GTA-446 subjects (p<0.05), but not in subjects with normal serum GTA-446 levels (p=0.86). The CRC incidence rate in subjects with low GTA-446 levels (3.1%) was over six times higher than for subjects with normal GTA-446 levels (0.5%) and approximately twice that of subjects with GI symptoms (2.0%). The results indicate that a low serum GTA-446 level is a significant risk factor for CRC and a sensitive predictor of early-stage disease, and that low-GTA levels could be responsible for the age-associated increase in CRC incidence. Implications for population-wide screening are discussed. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 103rd Annual Meeting of the American Association for Cancer Research; 2012 Mar 31-Apr 4; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2012;72(8 Suppl):Abstract nr 4515. doi:1538-7445.AM2012-4515

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.064
GPT teacher head0.383
Teacher spread0.319 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2012
Admission routes1
Has abstractyes

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