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Isolation and characterization of carbonic anhydrases from the marine diatom <i>Phaeodactylum tricornutum</i>

2007· article· en· W2044456476 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenuePhysiologia Plantarum · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicEnzyme function and inhibition
Canadian institutionsYork University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsPhaeodactylum tricornutumBiochemistryIsozymeMolecular biologyBiologyPolyacrylamide gel electrophoresisPolyclonal antibodiesGel electrophoresisCarbonic anhydraseChemistryEnzymeAntibodyAlgaeBotany

Abstract

fetched live from OpenAlex

Carbonic anhydrase (CA) isozymes were identified and isolated from three strains of Phaeodactylum tricornutum [University of Texas Culture Collection (UTEX 640), North Eastern Pacific Culture Collection at the University of British Columbia B31 and Culture Collection of Algae and Protozoa 1052/1A]. External (CA ext ) and internal CA activity was detected by potentiometric assay of intact cells and cell homogenates of air and high CO 2 ‐grown cells. CA ext was detected only in UTEX 640 grown under CO 2 ‐limited conditions and present in trace amounts in cells grown on high CO 2 . CA isozymes in cells extracts were separated by cellulose acetate electrophoresis and by sodium dodecyl sulfate‐polyacrylamide gel electrophoresis. All three strains had two CA bands in common, while UTEX 640 had a third, faster‐running band which was absent from extracts of high CO 2 ‐grown cells and thus was the external isozyme. The internal CA isoforms of the UTEX 640 strain were shown to have molecular masses of 28 and 25 kDa, and the external 24 kDa. A fourth CA ext isozyme with a molecular weight of 23.5 kDa was later detected using a polyclonal CA antibody. The CA isozymes were low‐CO 2 ‐inducible proteins because Western blot analysis, using a polyclonal antibody, indicated that CA expression was repressed in high CO 2 ‐grown cells. CA localization, using both immunofluorescence and immunogold techniques, with air‐grown cells indicated that the CA ext was located in the periplasmic space and on the cell membrane, whereas in high CO 2 ‐grown cells only internal CA was detected.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.415
Threshold uncertainty score0.270

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.201
Teacher spread0.195 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it