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Record W2046039464 · doi:10.1063/1.3684628

Density functional theory guided Monte Carlo simulations: Application to melting of Na13

2012· article· en· W2046039464 on OpenAlexaff
Satya Bulusu, René Fournier

Bibliographic record

VenueThe Journal of Chemical Physics · 2012
Typearticle
Languageen
FieldEarth and Planetary Sciences
Topicnanoparticles nucleation surface interactions
Canadian institutionsYork University
Fundersnot available
KeywordsMonte Carlo methodStatistical physicsDensity functional theoryMonte Carlo molecular modelingDynamic Monte Carlo methodComputer scienceMarkov chain Monte CarloPhysicsMathematicsStatistics

Abstract

fetched live from OpenAlex

We present a density functional theory (DFT) based Monte Carlo simulation method in which a simple energy function gets fitted on-the-fly to DFT energies and gradients. The fitness of the energy function gets tested periodically using the classical importance function technique [R. Iftimie, D. Salahub, D. Wei, and J. Schofield, J. Chem. Phys. 113, 4852 (2000)]. The function is updated to fit the DFT energies and gradients of the most recent structures visited whenever it fails to achieve a preset accuracy. In this way, we effectively break down the problem of fitting the entire potential energy surface (PES) into many easier problems, which are to fit small local regions of the PES. We used the scaled Morse potential empirical function to guide a DFT Monte Carlo simulation of Na(13) at various temperatures. The use of empirical function guide produced a computational speed-up of about 7 in our test system without affecting the quality of the results.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.019

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.260
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2012
Admission routes1
Has abstractyes

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Same venueThe Journal of Chemical PhysicsSame topicnanoparticles nucleation surface interactionsFrench-language works237,207