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Record W2047180898 · doi:10.1186/1710-1492-7-s2-a26

Reproducibility of neutrophil percentages in pooled and non-pooled nasal lavage samples

2011· article· en· W2047180898 on OpenAlexaffvenue
Dominik Alex Nowak, Penelope J. Ferrie, Paul K. Keith

Bibliographic record

VenueAllergy Asthma and Clinical Immunology · 2011
Typearticle
Languageen
FieldMedicine
TopicAsthma and respiratory diseases
Canadian institutionsMcMaster UniversityUniversity of Toronto
Fundersnot available
KeywordsCutoffIntraclass correlationMedicineEosinophilAbsolute neutrophil countReproducibilityNasal cavityNasal LavageInternal medicineNoseChemistrySurgeryChromatographyAsthma

Abstract

fetched live from OpenAlex

Neutrophils form a host’s main immediate immune response. COPD, ozone, infection and other factors have been shown to increase neutrophils found in blood, sputum and nasal lavage. Nasal lavage is used to collect cells and inflammatory mediators from the nasal cavity, and can be used quantify neutrophilic response to inhaled stimuli. To compare the reproducibility of neutrophil percentage in a single sample lavage, SSL, versus multiple sample lavage, MSL (3 lavages performed 15 minutes apart and pooled). Randomized crossover trial of nasal lavage performed on 4 visits 7-10 days apart, alternating between SSL and MSL done in 7 subjects with perennial allergic rhinitis, 7 with bilateral nasal polyposis and 7 controls. The mean (±SEM) neutrophil percentage was not significantly different between the two methods (80 ±12 for SSL, 86 ±8 for MSL, p=0.2). At a minimum total cell count (TCC) cutoff of ≥20, the neutrophil percentage intraclass correlation (ICC) was similar but not sufficiently reproducible for SSL at 0.588 compared to MSL at 0.641. For samples with TCC≥100, the neutrophil percentage ICC of SSL was 0.93 (excellent correlation) and that of MSL was 0.676 (satisfactory). The evaluable samples for TCC≥100 were 60/84 for SSL and 67/84 for MSL. We previously demonstrated in the same experiment that a minimal TCC cutoff of ≥100 cells gave excellent eosinophil percentage ICC for both methods (>0.8). SSL ICC was superior to MSL in measuring nasal lavage neutrophil percentage. This method could be used to assess the effects of inhalant stimuli on the nasal cavity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.011
metaresearch head score (Gemma)0.014
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.057

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0110.014
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.314
Teacher spread0.278 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes2
Has abstractyes

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