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Record W2048303662 · doi:10.1186/1753-6561-5-s7-p141

Effect of inorganic nitrogen concentration in co-culture and regeneration media on Agrobacterium tumefaciens growth and on the regenerative capacity of transformed Pinus radiataembryonal mass

2011· article· en· W2048303662 on OpenAlexaff
Regis Le-Feuvre, Claudia Triviño, Ana M. Sabja, Krystyna Klimaszewska

Bibliographic record

VenueBMC Proceedings · 2011
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant tissue culture and regeneration
Canadian institutionsNatural Resources CanadaCanadian Forest Service
Fundersnot available
KeywordsAgrobacterium tumefaciensPinus radiataSomatic embryogenesisRadiataRegeneration (biology)BotanyHorticultureBiologyAgrobacteriumGerminationGenetically modified cropsGrowth mediumTransgeneChemistryExplant cultureCell biologyBiochemistryVignaBacteriaGeneGeneticsIn vitro

Abstract

fetched live from OpenAlex

The Genetic Engineering program at Genomica Forestal SA, Chile (GFSA) has a goal of generating stably transformed radiata pine for in planta evaluation of candidate genes. Regeneration of transgenic plants depends mainly on two factors: regeneration ability of transformed cells and stable transgene integration and expression. In several conifer species, including radiata pine, transgenics have been regenerated through cocultivation of Agrobacterium tumefaciens with embryogenic cells [1-3]. However, in our first experiments using MSG [4] culture medium we found that radiata pine embryonal masses did not recover easily after co cultivation and that there was an excessive overgrowth of bacterial cells in spite of using bacteriostatics in the medium. This impediment prompted our study on testing other culture medium formulations, routinely used in conifer somatic embryogenesis, on the growth of A. tumefaciens GV3101. The tested media were: MSG, DCR [5], and modified Litvay [6] MLV. Of the three media MSG supported significantly higher bacterial growth than the other two media. One of the major differences in the composition of these media is inorganic nitrogen concentration (NH4NO3 and KNO3). Compared with MLV and DCR, MSG has the lowest concentration of inorganic nitrogen (100 mgl-1 compared with 340 in DCR and 950 mgl-l in MLV) provided in the sole form of KNO3. Based on our results and the work of others, we concluded that low nitrate concentration in MSG medium promoted A. tumefaciens growth and this had a deleterious influence on the viability of radiata pine cells during co cultivation, and also rendered eradication of bacterial cells difficult. Comparison of growth of radiata pine embryonal mass on the three media did not show statistically significant differences. A strategy for producing transgenic radiata pine for in planta transgene expression and stability study will be presented.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.366

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.212
Teacher spread0.198 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

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