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Record W2051401621 · doi:10.1055/s-2009-1216521

Localization of NAD+ Synthesis Enzymes in the Pathogenic Yeast Candida glabrata

2009· article· en· W2051401621 on OpenAlexfundno aff
A Addison, SJ Pan, BP Cormack

Bibliographic record

VenuePlanta Medica · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCalcium signaling and nucleotide metabolism
Canadian institutionsnot available
FundersNational Institute on Drug AbuseAgricultural Research ServiceUniversity of British ColumbiaUniversity of Illinois at Urbana-ChampaignChinese Academy of SciencesKurukshetra UniversityUniversity of Illinois at ChicagoNational Oceanic and Atmospheric AdministrationU.S. Food and Drug AdministrationNational Science Foundation of Sri LankaUniversity of ColomboU.S. Department of AgricultureWestern Carolina UniversityInternational Science CouncilNational Center for Complementary and Alternative MedicineChina Academy of Traditional Chinese MedicineNational Institutes of HealthNational Center for Research ResourcesNational Institute of Allergy and Infectious DiseasesTürkiye Bilimsel ve Teknolojik Araştırma KurumuHong Kong Polytechnic UniversityNational Science FoundationDeutsche KrebshilfeNational Natural Science Foundation of ChinaTata TrustsUniversity Grants CommissionWake Forest University
KeywordsNAD+ kinaseCandida glabrataNicotinamide adenine dinucleotideBiochemistryBiologyEnzymeAuxotrophyNicotinamideYeastCandida albicansMicrobiologyEscherichia coliGene

Abstract

fetched live from OpenAlex

Candida glabrata is an opportunistic yeast pathogen of humans and accounts for approximately 4% of all catheter associated urinary tract infection. It is normally controlled by the body's immune system and the body's bacteria flora, but can cause serious mucosal and systemic infecitons. C. glabrata is a nicotinamide adenine dinucleotide (NAD + ) auxotroph, which depends on the environmental supply of NAD + precursors using nicotinamide riboside (NR), nicotinic acid (NA), and nicotinamide (NAM) as NAD + precursors. These precursors are used in a functional Preiss-Handler pathway to produce NAD + . We focused on the location of enzymes used in the Preiss-Handler pathway of C. glabrata under conditions replete for NAD + precursors and under extreme conditions such as NAD + precursor starvation. The C-terminus of the Npt1, Qns1, Nrk1 and Pnc1 was tagged with GFP to identify the location of the enzymes in the yeast before and after starvation of NA and NR. Under the fluorescent microscope, localization of enzymes was found in the cytoplasm before and after starvation. Therefore, within the limits of our assay, we conclude that localization of the Preiss-Handler pathway enzymes in C. glabrata is unaffected by environmental conditions. We intend to confirm and extend these results by exploring the subcellular localization of pathway enzymes using different tags for localization.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.229
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

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