Histone H2AX Phosphorylation as a Predictor of Radiosensitivity and Target for Radiotherapy
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Bibliographic record
Abstract
Based on the role of phosphorylation of the histone H2A variant H2AX in recruitment of DNA repair and checkpoint proteins to the sites of DNA damage, we have investigated γH2AX as a reporter of tumor radiosensitivity and a potential target to enhance the effectiveness of radiation therapy. Clinically relevant ionizing radiation (IR) doses induced similar patterns of γH2AX focus formation or immunoreactivity in radiosensitive and radioresistant human tumor cell lines and xenografted tumors. However, radiosensitive tumor cells and xenografts retained γH2AX for a greater duration than radioresistant cells and tumors. These results suggest that persistence of γH2AX after IR may predict tumor response to radiotherapy. We synthesized peptide mimics of the H2AX carboxyl-terminal tail to test whether antagonizing H2AX function affects tumor cell survival following IR. The peptides did not alter the viability of unirradiated tumor cells, but both blocked induction of γH2AX foci by IR and enhanced cell death in irradiated radioresistant tumor cells. These results suggest that H2AX is a potential molecular target to enhance the effects of radiotherapy. Based on the role of phosphorylation of the histone H2A variant H2AX in recruitment of DNA repair and checkpoint proteins to the sites of DNA damage, we have investigated γH2AX as a reporter of tumor radiosensitivity and a potential target to enhance the effectiveness of radiation therapy. Clinically relevant ionizing radiation (IR) doses induced similar patterns of γH2AX focus formation or immunoreactivity in radiosensitive and radioresistant human tumor cell lines and xenografted tumors. However, radiosensitive tumor cells and xenografts retained γH2AX for a greater duration than radioresistant cells and tumors. These results suggest that persistence of γH2AX after IR may predict tumor response to radiotherapy. We synthesized peptide mimics of the H2AX carboxyl-terminal tail to test whether antagonizing H2AX function affects tumor cell survival following IR. The peptides did not alter the viability of unirradiated tumor cells, but both blocked induction of γH2AX foci by IR and enhanced cell death in irradiated radioresistant tumor cells. These results suggest that H2AX is a potential molecular target to enhance the effects of radiotherapy. Radiotherapy (RT) 1The abbreviations used are: RT, radiotherapy; UnphosP, unphosphorylated H2AX tail peptide; PhosP, phosphorylated H2AX tail peptide; DAPI, 4′,6-diamidino-2-phenylindole; IR, ionizing radiation; MEF, mouse embryo fibroblast; Gy, Gray; PI, propidium iodide. remains an important form of local and regional cancer therapy. Approximately 50-70% of all cancer patients receive RT during their treatment. Advances in tumor imaging and physical targeting of ionizing radiation (IR) (1.Webb S. Lancet Oncol. 2000; 1: 30-36Abstract Full Text Full Text PDF PubMed Scopus (42) Google Scholar, 2.Suit H. Int. J. Radiat. Oncol. Biol. Phys. 2002; 53: 798-809Abstract Full Text Full Text PDF PubMed Scopus (128) Google Scholar) and optimization of IR delivery schedules from single treatments to continuous irradiation have yielded significant improvements in patient outcome. Nonetheless, many tumors are poorly controlled by RT alone. Two major strategies to enhance the effects of IR have offered clinical benefit. The use of cytotoxic chemotherapy as a radiosensitizer (3.Vokes E.E. Haraf D.J. Brockstein B.E. Weichselbaum R.R. Semin. Radiat. Oncol. 1999; 9: 70-76PubMed Google Scholar) is based on the rationale that additional DNA damage may lower the threshold of cell death by IR. As a second approach, biological targeting (4.Mundt A.J. Roeske J.C. Weichselbaum R.R. Bast R.C. Kufe D.W. Pollock R.E. Weichselbaum R.R. Holland J.F. Frei E. Cancer Medicine. 5th Ed. B. C. Decker, Hamilton, Canada2000: 465-478Google Scholar, 5.Milas L. Mason K.A. Liao Z. Ang K.K. Head Neck. 2003; 25: 152-167Crossref PubMed Scopus (95) Google Scholar) antagonizes physiological survival mechanisms of tumors. Current biological strategies include use of angiogenesis inhibitors (6.Mauceri H.J. Hanna N.N. Beckett M.A. Gorski D.H. Staba M.J. Stellato K.A. Bigelow K. Heimann R. Gately S. Dhanabal M. Soff G.A. Sukhatme V.P. Kufe D.W. Weichselbaum R.R. Nature. 1998; 394: 287-291Crossref PubMed Scopus (656) Google Scholar, 7.Abdollahi A. Lipson K.E. Han X. Krempien R. Trinh T. Weber K.J. Hahnfeldt P. Hlatky L. Debus J. Howlett A.R. Huber P.E. Cancer Res. 2003; 63: 3755-3763PubMed Google Scholar), hormonal blockade (8.D'Amico A.V. Schultz D. Loffredo M. Dugal R. Hurwitz M. Kaplan I. Beard C.J. Renshaw A.A. Kantoff P.W. JAMA (J. Am. Med. Assoc.). 2000; 284: 1280-1283Crossref PubMed Scopus (152) Google Scholar), inhibitors of growth factor receptors (9.Sartor C.I. Semin. Radiat. Oncol. 2003; 13: 22-30Crossref PubMed Scopus (66) Google Scholar, 10.Weichselbaum R.R. Cancer J. Sci. Am. 1995; 1: 28PubMed Google Scholar), and gene therapy (11.Chmura S.J. Gupta N. Advani S.J. Kufe D.W. Weichselbaum R.R. Semin. Radiat. Oncol. 2001; 11: 338-345Crossref PubMed Scopus (8) Google Scholar, 12.Guha C. Guha U. Tribius S. Alfieri A. Casper D. Chakravarty P. Mellado W. Pandita T.K. Vikram B. Gene Ther. 2000; 7: 852-858Crossref PubMed Scopus (40) Google Scholar). Despite the promise of each of these strategies, our fundamental lack of understanding of molecular determinants of tumor response to IR has limited the success of all of these approaches to date. It remains controversial whether IR-induced DNA damage mediates its tumoricidal effects predominantly via apoptosis, mitotic catastrophe, terminal differentiation, and/or other mechanisms (13.Meyn R.E. Stephens L.C. Milas L. Cancer Metastasis Rev. 1996; 15: 119-131Crossref PubMed Scopus (79) Google Scholar, 14.Roninson I.B. Broude E.V. Chang B.D. Drug Resist. Update. 2001; 4: 303-313Crossref PubMed Scopus (621) Google Scholar). Further, the well known differences between specific tumors in radiosensitivity have been ascribed to a wide range of biological effects. In particular, tissue origin, growth kinetics, loss of apoptotic and/or checkpoint responses (15.Mundt A.J. Roeske J.C. Chaung P.D. Weichselbaum R.R. Holland J.F. Kufe D.W. Pollock R.E. Weichselbaum R.R. Frei E. Bast R.C. Holland-Frei Cancer Medicine. 5th Ed. B. C. Decker, Hamilton, Canada2003: 585-604Google Scholar, 16.Liu V.F. Boubnov N.V. Weaver D.T. Stem Cells. 1995; 13: 117-128PubMed Google Scholar), increased DNA repair (17.Robson T. Price M.E. Moore M.L. Joiner M.C. McKelvey-Martin V.J. McKeown S.R. Hirst D.G. Int. J. Radiat. Biol. 2000; 76: 617-623Crossref PubMed Scopus (32) Google Scholar, 18.Hansen L.T. Lundin C. Helleday T. Poulsen H.S. Sorensen C.S. Petersen L.N. Spang-Thomsen M. Lung Cancer. 2003; 40: 157-164Abstract Full Text Full Text PDF PubMed Scopus (29) Google Scholar), and microenvironmental (19.Gorlach A. Acker H. Adv. Exp. Med. Biol. 1994; 345: 343-350Crossref PubMed Scopus (4) Google Scholar, 20.Vaupel P. Hockel M. Adv. Exp. Med. Biol. 2003; 510: 45-49Crossref PubMed Scopus (22) Google Scholar) and stromal factors (21.Budach W. Taghian A. Freeman J. Gioioso D. Suit H.D. J. Natl. Cancer. Inst. 1993; 85: 988-993Crossref PubMed Scopus (66) Google Scholar) may each play critical roles in determining tumor curability following radiotherapy. Importantly, the physiological target of IR is not DNA alone but rather DNA in the context of chromatin (22.Green C.M. Almouzni G. EMBO Rep. 2002; 3: 28-33Crossref PubMed Scopus (178) Google Scholar, 23.Smerdon M.J. Conconi A. Prog. Nucleic Acids Res. Mol. Biol. 1999; 62: 227-255Crossref PubMed Scopus (117) Google Scholar) within a complex and highly regulated protein-DNA structure. Although initial tests have suggested that modulating chromatin function is highly attractive for biological targeting (24.Martinez-Lopez W. Folle G.A. Obe G. Jeppesen P. Chromosome Res. 2001; 9: 69-75Crossref PubMed Scopus (43) Google Scholar, 25.Sankaranarayanan K. von Duyn A. Loos M.J. Meschini R. Natarajan A.T. Genet. Res. 1990; 56: 267-276Crossref PubMed Scopus (12) Google Scholar, 26.Chapman J.D. Int. J. Radiat. Biol. 2003; 79: 71-81Crossref PubMed Google Scholar), deregulating chromatin function remains relatively unexplored as an approach to enhance anti-tumor effects of IR. The nucleosome, the fundamental unit of chromatin organization in eukaryotes, consists of ∼200 bp of DNA wrapped around an octamer of four pairs of histones H2A, H2B, H3, and H4 (27.Wolffe A.P. Chromatin: Structure and Function. 3rd Ed. Academic Press, Inc., San Diego1999Google Scholar). The histone globular domains comprise the nucleosome core, whereas the histone tails protrude, providing potential sites for protein modification such as acetylation, methylation, and phosphorylation. These histone tail modifications alter DNA accessibility and nucleosome dynamics (28.Fischle W. Wang Y. Allis C.D. Curr. Opin. Cell Biol. 2003; 15: 172-183Crossref PubMed Scopus (986) Google Scholar), thereby affecting regulation of gene expression (29.Eberharter A. Becker P.B. EMBO Rep. 2002; 3: 224-229Crossref PubMed Scopus (687) Google Scholar), DNA repair (30.Hasan S. Hottiger M.O. J. Mol. Med. 2002; 80: 463-474Crossref PubMed Scopus (66) Google Scholar), and other nuclear events. Histone H2AX (31.Redon C. Pilch D. Rogakou E. Sedelnikova O. Newrock K. Bonner W. Curr. Opin. Genet. Dev. 2002; 12: 162-169Crossref PubMed Scopus (630) Google Scholar, 32.Sedelnikova O.A. Pilch D.R. Redon C. Bonner W.M. Cancer Biol. Ther. 2003; 2: 233-235Crossref PubMed Scopus (253) Google Scholar), a minor histone H2A variant, encodes a conserved Ser-Gln-Glu (SQE) motif in the carboxyl-terminal tail. IR exposure induces rapid phosphorylation of the Ser residue (Ser139) by ATM/ATR family kinases (33.Rogakou E.P. Pilch D.R. Orr A.H. Ivanova V.S. Bonner W.M. J. Biol. Chem. 1998; 273: 5858-5868Abstract Full Text Full Text PDF PubMed Scopus (4162) Google Scholar, 34.Burma S. Chen B.P. Murphy M. Kurimasa A. Chen D.J. J. Biol. Chem. 2001; 276: 42462-42467Abstract Full Text Full Text PDF PubMed Scopus (1480) Google Scholar, 35.Shiloh Y. Nat. Rev. Cancer. 2003; 3: 155-168Crossref PubMed Scopus (2156) Google Scholar) to form foci of γH2AX immunoreactivity at DNA double strand break sites (36.Rogakou E.P. Boon C. Redon C. Bonner W.M. J. Cell Biol. 1999; 146: 905-916Crossref PubMed Scopus (1972) Google Scholar, 37.Sedelnikova O.A. Rogakou E.P. Panyutin I.G. Bonner W.M. Radiat. Res. 2002; 158: 486-492Crossref PubMed Scopus (543) Google Scholar). γH2AX foci also form at DNA double strand breaks that arise physiologically such as during B or T cell receptor rearrangement or meiotic crossing over (38.Gellert M. Annu. Rev. Biochem. 2002; 71: 101-132Crossref PubMed Scopus (613) Google Scholar, 39.Hunter N. Valentin Borner G. Lichten M. Kleckner N. Nat. Genet. 2001; 27: 236-238Crossref PubMed Scopus (72) Google Scholar). Targeting chromatin modifications specific to DNA double strand breaks such as histone H2AX phosphorylation might enhance the cytotoxic effects of IR while circumventing adverse effects on unirradiated cells. Insofar as the phosphorylation of H2AX at DSBs has been implicated in the timely recruitment and/or retention of DNA repair and checkpoint proteins such as BRCA1 to sites of DNA damage (40.Fernandez-Capetillo O. Chen H.T. Celeste A. Ward I. Romanienko P.J. Morales J.C. Naka K. Xia Z. Camerini-Otero R.D. Motoyama N. Carpenter P.B. Bonner W.M. Chen J. Nussenzweig A. Nat Cell Biol. 2002; 4: 993-997Crossref PubMed Scopus (574) Google Scholar, 41.Kobayashi J. Tauchi H. Sakamoto S. Nakamura A. Morishima K. Matsuura S. Kobayashi T. Tamai K. Tanimoto K. Komatsu K. Curr. Biol. 2002; 12: 1846-1851Abstract Full Text Full Text PDF PubMed Scopus (254) Google Scholar, 42.Carbone R. Pearson M. Minucci S. Pelicci P.G. Oncogene. 2002; 21: 1633-1640Crossref PubMed Scopus (164) Google Scholar, 43.Celeste A. Fernandez-Capetillo O. Kruhlak M.J. Pilch D.R. Staudt D.W. Lee A. Bonner R.F. Bonner W.M. Nussenzweig A. Nat Cell Biol. 2003; 5: 675-679Crossref PubMed Scopus (815) Google Scholar, 44.Furuta T. 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Further, a has suggested a between γH2AX immunoreactivity and cell death after cytotoxic treatments Cancer Res. 2003; 63: Google Scholar). we have investigated H2AX phosphorylation as a of and its potential as a biological we that γH2AX foci after IR exposure in radiosensitive tumor cell lines but that radioresistant cell lines H2AX foci Further, histone H2AX phosphorylation in a radioresistant tumor cell enhanced cell These for chromatin modifications as a for response and a of for targeting chromatin in Cell and lines in by cells in of or cells in of the of survival as (40.Fernandez-Capetillo O. Chen H.T. Celeste A. Ward I. Romanienko P.J. Morales J.C. Naka K. Xia Z. Camerini-Otero R.D. Motoyama N. Carpenter P.B. Bonner W.M. Chen J. Nussenzweig A. Nat Cell Biol. 2002; 4: 993-997Crossref PubMed Scopus (574) Google Scholar). cell in at each and/or to of tissue cells for of γH2AX foci on or in a at at irradiated or Gy, to the tissue for and for and and second to a of Gy, Gy, and a to a of Gy, Gy, Gy, and of xenografts a at tumors a of ∼200 The and the of the mouse as J. Tauchi H. Sakamoto S. Nakamura A. Morishima K. Matsuura S. Kobayashi T. Tamai K. Tanimoto K. Komatsu K. Curr. Biol. 2002; 12: 1846-1851Abstract Full Text Full Text PDF PubMed Scopus (254) Google Scholar). the irradiated and the tumor and for and or in and as R.R. W. Beckett M. T. D. J. Natl. Sci. U. S. A. PubMed Scopus Google Scholar), by or γH2AX Inc., or a the D. H2AX of W. and by In all protein of the by after to or by on for in in and γH2AX and or Inc., as on an a San to and as for γH2AX foci or of of a of cells for each of BRCA1 from to human H2AX in their unphosphorylated and phosphorylated synthesized and in at and cells to the to to the of or tumor cells a peptide yielded cells cells IR as at for and for as of cells after IR imaging to propidium of H2AX in used radioresistant and radiosensitive human cell cell lines R.R. W. Beckett M. T. D. J. Natl. Sci. U. S. A. PubMed Scopus Google Scholar) to the between radiation and γH2AX focus formation over the relevant range from to we the radiosensitivity of and by as by loss of propidium and survival by a formation after Gy, of cells and of cells for whereas after Gy, increased to of and of cells Despite differences in IR cell death in both and We these of cell death the of γH2AX foci following IR exposure and after Gy, of γH2AX foci of cells Gy, of and of γH2AX in of both cell at and γH2AX immunoreactivity also increased IR in both and cells. These that induction of γH2AX foci is IR and suggest that γH2AX is an of survival and induction of We the of H2AX phosphorylation in and cells after the relevant of of and of viability by after Gy, of and of cells retained γH2AX but the of cells foci foci in of cells and of cells. foci in of but retained in of the of cells foci to whereas at for of γH2AX in the cell for and for of γH2AX for the of γH2AX foci cell the between γH2AX and radiosensitivity in human tumor cells, we induction and loss of γH2AX from and cell lines from a single human cell survival following radiation as by and survival Beckett M.A. Weichselbaum R.R. J. Res. 1995; Full Text PDF PubMed Scopus Google Scholar). induced γH2AX foci to a similar in each cell but the of γH2AX focus after IR, of the relatively radioresistant cells γH2AX whereas of retained all cells of whereas of We γH2AX in and human cell lines that in radiosensitivity M.E. D. M. J.F. Natl. Sci. U. S. A. PubMed Scopus Google Scholar). A. Beckett and R. R. induced γH2AX in of and of cells at of radioresistant cells of radiosensitive cells of γH2AX foci might H2AX and/or from phosphorylated and cell and after by H2AX immunoreactivity by loss of γH2AX However, H2AX protein did not in the following IR not also in based on and of tumors after IR. A. Beckett and R. R. we γH2AX after irradiation of tumors in tissue and after Gy, and by induced γH2AX in both and immunoreactivity from tumors but in the tumors. these results that the of of γH2AX foci and/or immunoreactivity the radiosensitivity of human tumor cells and γH2AX after the of doses of IR on γH2AX in a for we γH2AX in and cells a single or of at a single of and of cells form in a survival of or cells induced foci in of cells, results the of cells foci of cells and of retained γH2AX foci after Gy, γH2AX foci in of and of cells. doses at and enhanced the differences in and persistence of γH2AX foci between and a and The initial survival to However, the second and doses on of and similar in the of not In cells, γH2AX foci similar after each that by of cells cell survival by each that after the Gy, and and the second and the of cells increased over the after the of cells retained The and of foci in cells also increased during the not of and cell similar of γH2AX immunoreactivity after the single In the a cells a γH2AX immunoreactivity after the second or γH2AX after each in the cells. after the γH2AX in greater than in H2AX γH2AX and BRCA1 on mouse A. Petersen S. Romanienko P.J. Fernandez-Capetillo O. Chen H.T. Sedelnikova O.A. B. E. M.J. Redon C. Pilch D.R. A. M. Camerini-Otero R.D. L. K. Bonner W.M. Nussenzweig M.C. Nussenzweig A. 2002; PubMed Scopus Google Scholar, J. H. S.R. J.C. C. K. R. Natl. Sci. U. S. A. 2002; PubMed Scopus Google Scholar), we that the from DNA damage to H2AX phosphorylation might recruitment and of repair and checkpoint thereby human tumor cells to IR. As an initial approach, we peptide mimics of the unphosphorylated and phosphorylated of the H2AX carboxyl-terminal tail as of H2AX for phosphorylation by kinases or to approach, we M.C. J. J. G. Nat. 2001; PubMed Scopus Google Scholar) H2AX tail and peptides and the cells for response to IR. that both and peptides cells, the peptides a and these of nuclear and both and after irradiation cells alone or a peptide and irradiated Gy, the However, H2AX tail peptide to the blocked the formation of γH2AX foci cell by IR increased following of the tail H2AX tail peptide survival after alone PhosP, H2AX has been to recruitment of DNA repair proteins to double breaks A. Fernandez-Capetillo O. Kruhlak M.J. Pilch D.R. Staudt D.W. Lee A. Bonner R.F. Bonner W.M. Nussenzweig A. Nat Cell Biol. 2003; 5: 675-679Crossref PubMed Scopus (815) Google Scholar, Rogakou E.P. M. Bonner W.M. Curr. Biol. 2000; Full Text Full Text PDF PubMed Scopus Google Scholar). whether the H2AX tail peptides may the recruitment of a DNA repair protein to DNA double strand we the of BRCA1 in BRCA1 foci in irradiated but in of the and H2AX tail these suggest that H2AX tail peptides may enhance cell death by DNA repair and/or checkpoint these we the tail peptides and human tumor cells. the and H2AX tail peptides blocked of γH2AX foci after Importantly, the H2AX tail peptides increased in both the and cells and However, the induction of in cells following all IR doses greater than in cells. the survival of radioresistant cells following by both H2AX tail peptides PhosP, the radiosensitive cells a loss of survival after H2AX of IR to the clinical between tumor the in curability tumors to DNA damage a understanding of the of to predict and tumor response As an initial approach, we the of γH2AX induction by relevant doses as a potential of tumor We a between radiosensitivity and the of γH2AX in human tumor cell lines and xenografted tumor a cell from a and cancer γH2AX foci a than a radiosensitive tumor cell similar in other pairs of radioresistant and radiosensitive human tumor cell by after a single radioresistant cell lines γH2AX whereas the radiosensitive cells We whether the γH2AX might suggest DNA the delivery of doses at both the differences in γH2AX and loss of viability between the radioresistant and radiosensitive tumor cells. It is relevant to that similar and doses are used in RT, γH2AX as a for of therapy. of γH2AX after RT might a of tumor radiosensitivity in therapy. γH2AX by might in radiation and/or delivery to each The between γH2AX and cell survival suggested a H2AX phosphorylation not DNA damage but mediates its test we synthesized peptide mimics of the H2AX carboxyl-terminal tail as of H2AX function in cells, as a of peptide blocked the formation of γH2AX and BRCA1 foci and cell death after IR. We that these peptides may H2AX for phosphorylation by ATM/ATR family kinases and/or for to DNA repair and checkpoint the peptides may the of a of DNA repair proteins at DSBs for repair of similar in the human tumor cell the response of the radioresistant cell The H2AX peptides to a in IR-induced at doses from to In a of cell survival after or H2AX peptides a loss of tumor cells, have a apoptotic response to IR by the peptide in both tumors that a apoptotic after IR greater radiation the of to the of human tumors remains (13.Meyn R.E. Stephens L.C. Milas L. Cancer Metastasis Rev. 1996; 15: 119-131Crossref PubMed Scopus (79) Google Scholar, 14.Roninson I.B. Broude E.V. Chang B.D. Drug Resist. Update. 2001; 4: 303-313Crossref PubMed Scopus (621) Google Scholar). Nonetheless, modulating IR-induced via H2AX tail peptides might a for radioresistant tumors. results of the that H2AX may in radiotherapy. the of cytotoxic used in M.A. D.G. Semin. Radiat. Oncol. 2003; 13: PubMed Scopus Google Scholar), targeting H2AX may have effects on unirradiated DNA double strand breaks limited to the tumor via physical targeting of biological targeting H2AX may a to We the of and other of the Weichselbaum and and their and
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Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it