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Record W2053855438 · doi:10.1074/jbc.m809046200

Glucose-dependent Insulinotropic Polypeptide and Glucagon-like Peptide-1 Modulate β-Cell Chromatin Structure

2009· article· en· W2053855438 on OpenAlexafffund
Sujin Kim, Cuilan Nian, Christopher H.S. McIntosh

Bibliographic record

VenueJournal of Biological Chemistry · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Chromatin Dynamics
Canadian institutionsUniversity of British Columbia
FundersCanadian Institutes of Health Research
KeywordsGlucagon-like peptide-1GlucagonChromatinPeptideChemistryCell biologyCellBiochemistryInternal medicineEndocrinologyBiologyDiabetes mellitusHormoneDNAMedicineType 2 diabetes

Abstract

fetched live from OpenAlex

Chromatin can exert a regulatory effect on gene transcription by modulating the access of transcription factors to target genes. In the present study, we examined whether nuclear actions of the incretin hormones, glucose-dependent insulinotropic polypeptide and glucagon-like peptide-1, involve modulation of β-cell chromatin structure. Stimulation of INS-1(832/13) β-cells or dispersed mouse islets with glucose-dependent insulinotropic polypeptide or glucagon-like peptide-1 resulted in the post-translational modification of core H3 histones, through acetylation and phosphorylation. Both increased histone H3 acetyltransferase and reduced histone deacetylase activities contributed. Subsequent studies demonstrated that incretin-mediated histone H3 modifications involved activation of protein kinase A, p42/44 mitogen-activated protein kinase (MAPK), and p38 MAPK signaling modules, resulting in the activation of mitogen- and stress-activated kinase-1. Additionally, modification of histone H3 increased its association with the transcription factor, phosphorylated cAMP-response element-binding protein (phospho-CREB) and with cAMP-responsive CREB coactivator 2. Incretin-activated CREB-related Bcl-2 transcription was greatly reduced by a histone acetyltransferase inhibitor, demonstrating the functional importance of histone H3 modification. This appears to be the first demonstration of β-cell chromatin modification in response to the incretins and the studies indicate that their regulatory effects involve coordinated nuclear interactions between specific signaling modules, chromatin-modifying enzymes and transcription factors. Chromatin can exert a regulatory effect on gene transcription by modulating the access of transcription factors to target genes. In the present study, we examined whether nuclear actions of the incretin hormones, glucose-dependent insulinotropic polypeptide and glucagon-like peptide-1, involve modulation of β-cell chromatin structure. Stimulation of INS-1(832/13) β-cells or dispersed mouse islets with glucose-dependent insulinotropic polypeptide or glucagon-like peptide-1 resulted in the post-translational modification of core H3 histones, through acetylation and phosphorylation. Both increased histone H3 acetyltransferase and reduced histone deacetylase activities contributed. Subsequent studies demonstrated that incretin-mediated histone H3 modifications involved activation of protein kinase A, p42/44 mitogen-activated protein kinase (MAPK), and p38 MAPK signaling modules, resulting in the activation of mitogen- and stress-activated kinase-1. Additionally, modification of histone H3 increased its association with the transcription factor, phosphorylated cAMP-response element-binding protein (phospho-CREB) and with cAMP-responsive CREB coactivator 2. Incretin-activated CREB-related Bcl-2 transcription was greatly reduced by a histone acetyltransferase inhibitor, demonstrating the functional importance of histone H3 modification. This appears to be the first demonstration of β-cell chromatin modification in response to the incretins and the studies indicate that their regulatory effects involve coordinated nuclear interactions between specific signaling modules, chromatin-modifying enzymes and transcription factors. The gastrointestinal incretin hormones, glucose-dependent insulinotropic polypeptide (GIP) 2The abbreviations used are: GIP, glucose-dependent insulinotropic polypeptide; GLP-1, glucagon-like peptide-1; HAT, histone acetyltransferase; HDAC, histone deacetylase; H3AT, histone H3 acetyltransferase; PKA, protein kinase A; MSK-1, mitogen- and stress-activated kinase-1; CREB, cAMP-response element-binding protein; phospho-CREB, phosphorylated cAMP-response element-binding protein; CBP, CREB-binding protein; ANOVA, analysis of variance; SAPK, stress-activated protein kinase; JNK, c-Jun N-terminal kinase; MAPK, mitogen-activated protein kinase; ERK, extracellular signal-regulated kinase; MEK, MAPK/ERK kinase; BSA, bovine serum albumin; TORC2, cAMP-responsive CREB coactivator 2. 2The abbreviations used are: GIP, glucose-dependent insulinotropic polypeptide; GLP-1, glucagon-like peptide-1; HAT, histone acetyltransferase; HDAC, histone deacetylase; H3AT, histone H3 acetyltransferase; PKA, protein kinase A; MSK-1, mitogen- and stress-activated kinase-1; CREB, cAMP-response element-binding protein; phospho-CREB, phosphorylated cAMP-response element-binding protein; CBP, CREB-binding protein; ANOVA, analysis of variance; SAPK, stress-activated protein kinase; JNK, c-Jun N-terminal kinase; MAPK, mitogen-activated protein kinase; ERK, extracellular signal-regulated kinase; MEK, MAPK/ERK kinase; BSA, bovine serum albumin; TORC2, cAMP-responsive CREB coactivator 2. and glucagon-like peptide-1 (GLP-1), exert pleiotropic effects on pancreatic islets that include the potentiation of glucose-stimulated insulin secretion, expansion of β-cell mass via induction of β-cell proliferation, and reduction of β-cell apoptosis (1Brubaker P.L. Drucker D.J. Endocrinology. 2004; 145: 2653-2659Crossref PubMed Scopus (469) Google Scholar, 2Drucker D.J. J. Clin. Invest. 2007; 117: 24-32Crossref PubMed Scopus (476) Google Scholar, 3Yusta B. Baggio L.L. Estall J.L. Koehler J.A. Holland D.P. Li H. Pipeleers D. Ling Z. Drucker D.J. Cell Metab. 2006; 4: 391-406Abstract Full Text Full Text PDF PubMed Scopus (320) Google Scholar, 4Baggio L.L. Drucker D.J. Gastroenterology. 2007; 132: 2131-2157Abstract Full Text Full Text PDF PubMed Scopus (2520) Google Scholar, 5Kim S.J. Choi W.S. Han J.S. Warnock G. Fedida D. McIntosh C.H.S. J. Biol. Chem. 2005; 280: 28692-28700Abstract Full Text Full Text PDF PubMed Scopus (27) Google Scholar, 6Ehses J.A. Casilla V.R. Doty T. Pospisilik J.A. Winter K.D. Demuth H.U. Pederson R.A. McIntosh C.H.S. Endocrinology. 2003; 144: 4433-4445Crossref PubMed Scopus (149) Google Scholar, 7Kim S.J. Winter K. Nian C. Tsuneoka M. Koda Y. McIntosh C.H.S. J. Biol. Chem. 2005; 280: 22297-22307Abstract Full Text Full Text PDF PubMed Scopus (193) Google Scholar, 8Kim S.J. Nian C. Widenmaier S. McIntosh C.H.S. Mol. Cell Biol. 2008; 28: 1644-1656Crossref PubMed Scopus (108) Google Scholar). Recently, members of two classes of incretin-related compounds have been approved by the FDA for the treatment of type 2 diabetes, the incretin mimetic exenatide (Byetta™) and the DPP-IV inhibitor sitagliptin (Januvia™), resulting in a burgeoning interest in this class of hormones. Although significant progress has been made in incretin biology over the past few years, there is relatively little known about their mode of action in gene regulation. In the current study we examined the possible involvement of GIP and GLP-1 in β-cell chromatin modification. Eukaryotic chromatin is composed of an octamer of four core histones (H2A, H2B, H3, and H4) around which 147 bp of DNA are wrapped. Chromatin can exert a regulatory effect on gene transcription by modulating accessibility of transcription factors to target genes (9Workman J.L. Kingston R.E. Annu. Rev. Biochem. 1998; 67: 545-579Crossref PubMed Scopus (956) Google Scholar). Different post-translational modifications in the N termini of the histones have been identified, including acetylation, methylation, phosphorylation, ubiquitination, sumoylation, ADP-ribosylation, deamination, and proline isomerization, and these modifications have direct effects on gene expression (10Strahl B.D. Allis C.D. Nature. 2000; 403: 41-45Crossref PubMed Scopus (6448) Google Scholar, 11Berger S.L. Curr. Opin. Genet. Dev. 2002; 2: 142-148Crossref Scopus (973) Google Scholar, 12Bernstein B.E. Schreiber S.L. Chem. Biol. 2002; 9: 1167-1173Abstract Full Text Full Text PDF PubMed Scopus (19) Google Scholar). Histone acetyltransferases (HATs) are involved in the acetylation of histone N termini, resulting in chromatin adopting an “open” conformation, whereas histone deacetylase (HDAC) generally promotes a “closed” conformation, by reversing the process (13Marmorstein R. Cell Mol. Life Sci. 2001; 58: 693-703Crossref PubMed Scopus (128) Google Scholar, 14Gregory P.D. Wagner K. Hörz W. Exp. Cell Res. 2001; 265: 195-202Crossref PubMed Scopus (224) Google Scholar, 15Cress W.D. Seto E. J. Cell Physiol. 2000; 184: 1-16Crossref PubMed Scopus (573) Google Scholar). Histone H2B has been shown to be acetylated at lysine residues 5, 12, 15, and 20 (16Cheung P. Allis C.D. Sassone-Corsi P. Cell. 2000; 103: 263-271Abstract Full Text Full Text PDF PubMed Scopus (816) Google Scholar, 17Thorne A.W. Kmiciek D. Mitchelson K. Sautiere P. Crane-Robinson C. Eur. J. Biochem. 1990; 193: 701-713Crossref PubMed Scopus (123) Google Scholar), whereas histone H3 is acetylated at lysines 9, 14, 18, and 23 (18Hansen J.C. Tse C. Wolffe A.P. Biochemistry. 1998; 37: 17637-17641Crossref PubMed Scopus (213) Google Scholar, 19Hendzel M.J. Wei Y. Mancini M.A. Van Hooser A. Ranalli T. Brinkley B.R. Bazett-Jones D.P. Allis C.D. Chromosoma. 1997; 106: 348-360Crossref PubMed Scopus (1490) Google Scholar). Among these sites, acetylation of H3 at Lys-9 has been considered to play a dominant role in histone deposition and chromatin assembly (18Hansen J.C. Tse C. Wolffe A.P. Biochemistry. 1998; 37: 17637-17641Crossref PubMed Scopus (213) Google Scholar, 19Hendzel M.J. Wei Y. Mancini M.A. Van Hooser A. Ranalli T. Brinkley B.R. Bazett-Jones D.P. Allis C.D. Chromosoma. 1997; 106: 348-360Crossref PubMed Scopus (1490) Google Scholar). Additionally, phosphorylation at serine 10 and 28 and threonine 1 has been shown to be tightly regulated for chromosome condensation during cell cycle progression (19Hendzel M.J. Wei Y. Mancini M.A. Van Hooser A. Ranalli T. Brinkley B.R. Bazett-Jones D.P. Allis C.D. Chromosoma. 1997; 106: 348-360Crossref PubMed Scopus (1490) Google Scholar, 20Goto H. Tomono Y. Ajiro K. Kosako H. Fujita M. Sakurai M. Okawa K. Iwamatsu A. Okigaki T. Takahashi T. Inagaki M. J. Biol. Chem. 1999; 274: 25543-25549Abstract Full Text Full Text PDF PubMed Scopus (374) Google Scholar, 21Preuss U. Landsberg G. Scheidtmann K.H. Nucleic Acids Res. 2003; 31: 878-885Crossref PubMed Scopus (152) Google Scholar). In the present study, we have shown that GIP and GLP-1 induce core histone H3 protein modifications through the regulation of histone H3 acetyltransferase (H3AT) and HDAC activity, and activation of protein kinase A (PKA), p42/44 mitogen-activated protein kinase (MAPK), p38 MAPK, and mitogen- and stress-activated kinase-1 (MSK-1) signaling modules are involved in this process. Additionally, modification of histone H3 increased its association with the transcription factor, phosphorylated cAMP-response element-binding protein (phospho-CREB) and with cAMP-responsive CREB coactivator 2 (TORC2) in the nucleus. Incretin-mediated post-translational modification of core histones is therefore likely to be an important component of their effects on gene transcription in β-cells. Cell Culture—INS-1 β-cells (clone 832/13) were kindly provided by Dr. C. B. Newgard (Duke University Medical Center, Durham, NC). INS-1 cells were cultured in 11 mm glucose RPMI 1640 (Sigma Laboratories, Natick, MA) supplemented with 2 mm glutamine, 50 μm β-mercaptoethanol, 10 mm HEPES, 1 mm sodium pyruvate, 10% fetal bovine serum, 100 unit/ml penicillin G-sodium, and 100 μg/ml streptomycin sulfate. Cell passages 45–70 were used. In incretin stimulation experiments a peptide concentration of 100 nm was used, because previous studies have demonstrated near-maximal β-cell responses at this concentration (7Kim S.J. Winter K. Nian C. Tsuneoka M. Koda Y. McIntosh C.H.S. J. Biol. Chem. 2005; 280: 22297-22307Abstract Full Text Full Text PDF PubMed Scopus (193) Google Scholar, 8Kim S.J. Nian C. Widenmaier S. McIntosh C.H.S. Mol. Cell Biol. 2008; 28: 1644-1656Crossref PubMed Scopus (108) Google Scholar). Islet Isolation—Male C57BL/6 mice (12 weeks old, Charles River) were anesthetized by intraperitoneal injection of pentobarbital (30–40 mg/kg). Islets were isolated by collagenase digestion and dispersed to single cells as described previously (22MacDonald P.E. Ha X.F. Wang J. Smukler S.R. Sun A.M. Gaisano H.Y. Salapatek A.M. Backx P.H. Wheeler M.B. Mol. Endocrinol. 2001; 15: 1423-1435Crossref PubMed Scopus (160) Google Scholar). Dispersed islets were cultured in RPMI 1640 supplemented with 5 mm glucose, 0.25% HEPES, 7.5% fetal bovine serum, 100 units/ml penicillin G-sodium, and 100 μg/ml streptomycin sulfate. Preparation of Nuclear Extracts—Nuclear proteins were isolated as described by Schreiber et al. (23Schreiber E. Matthias P. Muller M.M. Schaffner W. Nucleic Acids Res. 1989; 17: 6419Crossref PubMed Scopus (3903) Google Scholar). Briefly, cells were washed with phosphate-buffered saline and disrupted with 200 μl of ice-cold buffer A (10 mm HEPES, pH 7.9, 10 mm KCl, 1.5 mm MgCl2, 1 mm EDTA, 1 mm dithiothreitol, 0.1% Nonidet P-40, and protease inhibitors). Following centrifugation, the resulting pellet was re-suspended in 20 μl of buffer B (20 mm HEPES, pH 7.9, 400 mm NaCl, 1 mm EDTA, 1 mm dithiothreitol, 20% glycerol, and protease inhibitors) and incubated on ice for 10 min. After clarification of the mixture by centrifugation, the supernatant (nuclear extract) was collected and subjected to Western blot analysis or enzyme activity assay. Western Blot Analysis—Protein samples were separated on a 13% SDS/PAGE gel and transferred onto nitrocellulose membranes (Bio-Rad Laboratories). Probing of the membranes was performed with acetyl-histone H3 (Lys-9), acetyl-histone H3 (Lys-18), acetyl-histone H3 (Lys-23), phospho-histone H3 (Ser-10), histone 3, and HDAC1, -2, -3, -4, -5, and -7 antibodies (Cell Signaling Technology, Beverly, MA). Immunoreactive bands were visualized by enhanced chemiluminescence (Amersham Biosciences) using horseradish peroxidase-conjugated IgG secondary antibodies. Confocal Microscopy—INS-1 cells were treated with GIP or GLP-1 (100 nm) for 24 h. Following treatment, immunocytochemical staining was performed using antibodies against acetyl-histone Lys-9, acetyl-histone Lys-18, or phospho-histone H3 and insulin and visualized with secondary and cells were using a were using the HDAC, H3AT, and HDAC and were used to enzyme activity of HDAC, H3AT, and MSK-1, to the activity is as activity to protein treatment, nuclear were and acetylated histones H3 at Lys-9, Lys-18, or phosphorylated histone H3 at were using protein A and histone H3 Lys-9, Lys-18, or histone H3 The were by and with or was and were by 100 of was used in the to Bcl-2 whereas 10 of was used in the The and used for the of Bcl-2 were as the and cycle was used as a of are as with the of experiments in the was using analysis of with as in the of on Histone H3 in effects of GIP and GLP-1 on the post-translational modification of histone H3 in INS-1 β-cells were first shown in 1 and GIP and GLP-1 (100 nm) treatment increased acetylation of histone H3 at Lys-9 and and phosphorylation at whereas there were significant in acetylation of histone H3 at of histone H3 at Lys-9 and and phosphorylation at demonstrated responses to GIP or GLP-1 staining of INS-1 β-cells the effects of incretins on histone H3 by Western histone modification were with dispersed mouse Both incretins increased acetylation of histone H3 at Lys-9 and and phosphorylation at the there were significant in acetylation of histone H3 at of on the of and effects of GIP and GLP-1 on protein or activity of chromatin-modifying enzymes were shown in 2 and there were significant in the protein of class 1 HDAC1, -2, and or the class 2 -5, and -7 Exp. Cell Res. 2001; PubMed Scopus Google Scholar, S. K.H. A. Y. Sci. 2003; PubMed Scopus Google treatment of INS-1 β-cells with GIP or GLP-1 (100 nm) for 24 h. treatment resulted in significant in HDAC activity incretin treatment resulted in in activity that was significant by with GLP-1 and for by 24 indicate that incretin β-cell chromatin by the activity of the HDAC and of chromatin-modifying Signaling in Incretin-mediated Histone H3 in GIP and GLP-1 a of in and the involvement in histone H3 modification of PKA, p42/44 MAPK, p38 MAPK, and stress-activated protein kinase activation J.A. Casilla V.R. Doty T. Pospisilik J.A. Winter K.D. Demuth H.U. Pederson R.A. McIntosh C.H.S. Endocrinology. 2003; 144: 4433-4445Crossref PubMed Scopus (149) Google Scholar, 8Kim S.J. Nian C. Widenmaier S. McIntosh C.H.S. Mol. Cell Biol. 2008; 28: 1644-1656Crossref PubMed Scopus (108) Google Scholar, J.A. S.L. Pederson R.A. McIntosh C.H.S. J. Biol. Chem. 2002; Full Text Full Text PDF PubMed Scopus Google Scholar, S. C. M.B. W. B. 2008; PubMed Scopus Google Scholar, H. A. R. Endocrinology. 2003; 144: PubMed Scopus Google Scholar, Endocrinology. 2001; PubMed Scopus Google Scholar, M. S. M. G. D. C. R. B. G. A. 2008; PubMed Scopus Google was and acetylation of histone H3 at Lys-9 and Lys-18, was greatly reduced or by of 10 MAPK kinase and p38 MAPK 10 whereas the inhibitor, was of histone H3 at in response to GIP and GLP-1, was greatly reduced by four 3, The that PKA, p42/44 MAPK, p38 MAPK, and protein are involved in incretin-mediated histone H3 modification to whether are involved in incretin-mediated of and HDAC in the nucleus. shown in of PKA, and p38 MAPK the and effects of GIP and GLP-1 on HDAC and was effect on the modulation of signaling modules are therefore involved in incretin-mediated of resulting in the post-translational modification of histone H3 core p42/44 MAPK, p38 MAPK, and are involved in incretin-mediated of A and effect of PKA, p42/44 MAPK, p38 MAPK, and on GIP and GLP-1 HDAC INS-1 cells were in mm glucose RPMI 0.1% and for 24 with 100 nm GIP or GLP-1 in the or of of PKA, p42/44 MAPK, p38 MAPK, and (10 (10 and were to cells during as as during GIP or GLP-1 Nuclear were isolated and HDAC activity was as described and effect of PKA, p42/44 MAPK, p38 MAPK, and on GIP and GLP-1 histone H3 INS-1 cells were treated as described nuclear were and activity was as described Western are of 3, and in was using with of in Incretin-mediated Histone H3 in protein kinase has been shown to be by PKA, MAPK, or in responses to or extracellular M. J. 1998; 17: PubMed Scopus Google Scholar, M. U. Cell. 2005; 17: PubMed Scopus Google Scholar). involvement in incretin-mediated histone H3 modification in pancreatic β-cells was therefore INS-1 β-cells were treated with GIP or GLP-1 (100 and Western blot were performed using antibodies against shown in GIP phosphorylation of at with phosphorylation 10 of GIP treatment, and the of GLP-1 phosphorylation of was with phosphorylation 20 of GLP-1 treatment, and to The phosphorylation of in with of INS-1 cells with GIP or GLP-1 for resulted in and in activity, is a and the inhibitor was to the involvement of the kinase in incretin stimulation of activity in INS-1 β-cells. shown in activity in response to GIP or GLP-1 was greatly reduced by has been to as a direct inhibitor of MSK-1, a specific inhibitor of to the regulatory of PKA, was or stimulation of activity and acetylation of histone H3 at Lys-9 and Lys-18, and phosphorylation of histone H3 at these that and are involved in incretin-mediated histone H3 modification. between Histone H3 and or in the functional of incretin-mediated post-translational modification of histone H3 were was previously demonstrated that GIP interactions between and S.J. Nian C. Widenmaier S. McIntosh C.H.S. Mol. Cell Biol. 2008; 28: 1644-1656Crossref PubMed Scopus (108) Google Scholar). In the current study, INS-1 β-cells were treated with GIP or GLP-1 (100 nm) for 24 and nuclear were with antibodies against histone H3 acetylated at Lys-9 or Lys-18, or phosphorylated at by for CREB or Both GIP and GLP-1 increased direct interactions between and with histone H3 acetylated at Lys-9 or Lys-18, or phosphorylated at functional of incretin-mediated histone H3 acetylation on target gene incretin-mediated Bcl-2 gene transcription was in the or of of INS-1 cells with GIP or GLP-1 (100 nm) for 24 resulted in to in Bcl-2 with and incretin-mediated Bcl-2 gene transcription was greatly reduced by inhibitor Incretin-mediated histone H3 modification is therefore likely to be an important of CREB-related transcription in pancreatic β-cells. of chromatin an important role in the regulation of gene transcription in post-translational modifications of core histone nuclear proteins have been to be with the and of target genes. including acetylation, phosphorylation, and methylation, are to of or activity T. Cell. 2007; Full Text Full Text PDF PubMed Scopus Google Scholar, S.L. Nature. 2007; PubMed Scopus Google Scholar). generally have direct activity, are to by with transcription factors. The resulting modifications of the core histone in the access of regulatory to the This regulatory and core histone proteins be activation and transcription to target are in using DNA In the present study, we examined the effects of the incretin on post-translational modifications of histone Both GIP and GLP-1 HDAC activity and increased activity in the and resulting in increased acetylation of histone H3 at Lys-9 and A and on the deacetylase activity were with on The deacetylase has been shown to 1 that are by phospho-CREB, resulting in histone and CREB G. E. H. S. M. Biol. 2003; PubMed Scopus Google Scholar). is therefore likely that the in activity were to effects on is known whether the reduction in activity resulted phosphorylation, or modification of the of the histone deacetylase enzymes have been shown to post-translational phosphorylation in the of for phosphorylation to have a effect on enzyme activity R. P. D. D. Biochem. Res. 2001; PubMed Scopus Google Scholar, P. A. K.H. Biochem. Res. 2007; PubMed Scopus Google Scholar). GIP GLP-1 was to on protein of a of HDAC enzymes A and proteins were to the of enzymes with histone Although treatment of INS-1 β-cells with GIP and GLP-1 (100 nm) for 24 resulted in a in histone H3 acetylation at Lys-18, GLP-1, and GIP, increased histone H3 acetylation at at treatment Although the actions of GIP on pancreatic β-cells have been to be to of GLP-1, these the of and for the regulation of incretin-mediated histone H3 modification and target gene have been to be for phosphorylation of histone 3, including a of the kinase K. S. A. Sassone-Corsi P. Mol. Cell Biol. 2001; PubMed Scopus Google Scholar), MSK-1, and A. S. J. 2003; PubMed Scopus Google Scholar). appears to be a that and are the Sci. 2003; Scholar, J.S. A. J. 2007; PubMed Scopus Google Scholar). Both p38 MAPK and have been shown to in cell and the current inhibitor studies provided for the involvement of and p38 MAPK in incretin-mediated phosphorylation of 3, in INS-1 β-cells. histone H3 acetylation at Lys-9 and Lys-18, as as the modulation of and HDAC activity were by PKA, and p38 MAPK are a of by which these signaling modules and HDAC is that and HDAC activities are by direct phosphorylation of the is that the acetyltransferase activity of is increased through phosphorylation p38 MAPK M. K. J. 2007; PubMed Scopus Google Scholar), protein kinase B Mol. Cell Biol. 2005; PubMed Scopus Google Scholar), and Wang J. Biol. Chem. 2007; Full Text Full Text PDF PubMed Scopus Google Scholar), and is possible that is the J.S. A. J. 2007; PubMed Scopus Google Scholar). Both GIP and GLP-1 increased activity and their to activity and histone H3 modification in with their to because is an inhibitor of MSK-1, its between and as the of a inhibitor of to the regulatory of PKA, incretin-mediated stimulation of activity, as as histone H3 acetylation and phosphorylation in response to GIP or therefore a in which GIP and GLP-1 via PKA, with as the for histone H3 modification The involved in stimulation of and activity to the involved in histone and their are The in activity, and increased histone H3 acetylation, be secondary to increased phosphorylation of the transcription The transcription coactivator CREB-binding protein activity, and have been shown to to CREB phosphorylated at This with is for activation of CREB J.C. M. Nature. PubMed Scopus Google Scholar, D. Sassone-Corsi P. Biochem. Sci. 1999; Full Text Full Text PDF PubMed Scopus Google Scholar, Annu. Rev. Biochem. 1999; PubMed Scopus Google Scholar), in histone acetylation, during the of gene transcription H. M. Mol. Cell Biol. 2000; PubMed Scopus Google Scholar). the has been shown to via a with protein 1 G. E. H. S. M. Biol. 2003; PubMed Scopus Google Scholar). In the present study, GIP and GLP-1 were to direct nuclear interactions between or and histone H3 acetylated at Lys-9 and or phosphorylated at that incretin-mediated histone H3 modification to the of Although the of histone acetylation is of importance for the regulation of gene in the between acetylation and have been shown to on pancreatic β-cell of was demonstrated to β-cell apoptosis and β-cell through a of activity M. J. S. P. T. 2007; PubMed Scopus Google Scholar). we that GIP expression of the protein Bcl-2 in β-cells S.J. Nian C. Widenmaier S. McIntosh C.H.S. Mol. Cell Biol. 2008; 28: 1644-1656Crossref PubMed Scopus (108) Google Scholar), and of an inhibitor has been shown to GIP or GLP-1 stimulation of Bcl-2 gene involvement of histone modification. the present studies indicate that in HDAC activity and increased activity, as as increased between acetyl-histone H3 and HDAC their effect on pancreatic β-cells. in of the interest in incretins and DPP-IV for the treatment of diabetes, be important to the signaling chromatin-modifying and to incretin-mediated effects on target gene expression in pancreatic β-cells. Dr. C. B. Newgard (Duke University Medical Center, Durham, for kindly with INS-1 β-cells (clone with

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.020
Threshold uncertainty score0.750

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.209
Teacher spread0.203 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations34
Published2009
Admission routes2
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