How low can STED go? Comparison of different write-erase beam combinations for stimulated emission depletion microscopy
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Bibliographic record
Abstract
We compare different beam combinations for stimulated emission depletion microscopy. The four considered copolarized, mutually symmetric, but complementary write + erase beam combinations are circularly polarized beam + circularly polarized vortex with charge +1 or -1, azimuthally polarized with a vortex + azimuthally polarized, and radially polarized beam + radially polarized with a vortex. The resulting fluorescent spot was calculated for plane incident pump and erase beams, for plane waves with added high NA annular ring apertures, and when both incident beams were optimized with amplitude-phase masks. For all three incident wave cases, the azimuthal polarization combination consistently produces spots 15%-30% smaller than the commonly used, circularly polarized light combination (the first from above). The two other polarization combinations produce even smaller, of the order of nanometers/0.003λ, fluorescent spots with a caveat of having nonzero erase beam intensity in the center. Nevertheless, these combinations can be advantageous when exploiting PF, i.e., using molecules that respond solely to the longitudinal (or only to transversal) component of the illuminating field.
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Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
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Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it