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Record W2059939049 · doi:10.1118/1.3613253

TU‐G‐211‐03: Automatic Segmentation of Non‐Small Cell Lung Carcinoma Using 3D Texture Features in Co‐Registered FDG PET/CT Images

2011· article· en· W2059939049 on OpenAlexaff
Daniel Markel, Curtis Caldwell, Hamideh Alasti, A. Sun, Hany Soliman, Jonguk Lee, Y. Ung, Peter McGhee, Dereck D. Webster

Bibliographic record

VenueMedical Physics · 2011
Typearticle
Languageen
FieldMedicine
TopicRadiomics and Machine Learning in Medical Imaging
Canadian institutionsSunnybrook Health Science Centre
Fundersnot available
KeywordsSegmentationArtificial intelligenceGround truthPattern recognition (psychology)SkewnessNuclear medicineComputer scienceConcordanceSørensen–Dice coefficientFeature (linguistics)Computer-aided diagnosisMedicineMathematicsImage segmentationStatistics

Abstract

fetched live from OpenAlex

Purpose: To evaluate the usage of a combination of FDG‐PET/CT features to improve automated segmentation of the gross tumor volume (GTV) in the thorax in order to reduce target definition uncertainty in radiotherapy. Methods: Features of co‐registered FDG‐PET/CT images of patients with non small cell lung carcinoma (NSCLC) were investigated using spatial gray‐level dependence matrices, neighborhood gray tone difference matrices, Tamura textures, first order statistics and structural characteristics. A training data set of PET and CT scans from 21 patients diagnosed with NSCLC was used. Feature samples were taken from regions of interest that included GTV, positive nodes and healthy structures found in the thorax. A decision tree incorporating KNN classifiers as nodes was trained to segment GTVs using an exhaustive search for the optimal combination of features by area under the curve (AUC) at each node. A validation set of 10 patients deemed difficult to contour was used and a probabilistic ground truth was derived from a combination of three observer contours using simultaneous truth and performance level estimation (STAPLE).Results: The concordance index of the three observers was found to average 0.370. CT skewness and PET coarseness were found to be the most useful discriminators when evaluated independently with AUCs of 0.705 and 0.972 respectively. Evaluation of the segmentation results using Dice coefficients found the resulting DTKNN outperformed a variety of thresholds including signal‐to‐background ratio and an implementation of the 3‐FLAB algorithm. Dice coefficients for the DTKNN averaged 0.65 and reached as high as 0.84. Conclusions: Incorporation of texture features from both modalities offers an improvement in segmentation accuracy over approaches that utilize each modality independently. The largest source of error was found to be the misregistration of PET to CT volumes and blurring of PET due to internal motion.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.299
Teacher spread0.281 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2011
Admission routes1
Has abstractyes

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