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Record W2060112412 · doi:10.1183/09031936.00027714

Tuberculosis diagnostics: which target product profiles should be prioritised?

2014· letter· en· W2060112412 on OpenAlexaff
Sandra V. Kik, Claudia M. Denkinger, Martina Casenghi, Caroline Vadnais, Madhukar Pai

Bibliographic record

VenueEuropean Respiratory Journal · 2014
Typeletter
Languageen
FieldMedicine
TopicTuberculosis Research and Epidemiology
Canadian institutionsMcGill University Health CentreMcGill University
FundersFood and Health Bureau
KeywordsTuberculosisProduct (mathematics)Computer scienceMedicineMathematicsPathology

Abstract

fetched live from OpenAlex

To the Editor: Globally, a third of all tuberculosis (TB) cases are not notified and many patients do not receive drug susceptibility testing (DST) [1]. New diagnostics can contribute to increased case detection, shorter diagnostic delay and reduced TB transmission. While the Xpert MTB/RIF assay (Cepheid Inc., Sunnyvale, CA, USA) is a much needed breakthrough [2], it may not reach lower tiers of the healthcare system [3] and doesn’t meet all needs ( e.g. cannot detect resistance against multiple drugs). Several promising diagnostics are under development and companies are showing interest in TB products, inspired by the success of Xpert MTB/RIF [4]. But which new TB diagnostics should they invest in, and what is the potential market size for these products? Stakeholders have expressed a need for different products, including a test for childhood TB [5], a simple point-of-care-test for active pulmonary TB [6], a molecular smear replacement test [7], DST for expected new drug regimens [8], predictive biomarkers for latent TB infection (LTBI) [9], and treatment monitoring [10]. Given the variety of these needs, it is important for product developers to have access to: 1) a clearly identified list of diagnostics that are considered high priority by the TB community; 2) well developed, detailed target product profiles (TPPs) for priority diagnostics; and 3) up-to-date market size estimates for the priority TPPs. These issues are being addressed by ongoing activities, supported by the Bill and Melinda Gates Foundation (Seattle, WA, USA) and other partners [3, 7, 11]. TPPs are useful to align the end-users needs …

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.013
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Meta-epidemiology (narrow), Research integrity, Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.060
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0060.013
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0010.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.013
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.078
GPT teacher head0.333
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations80
Published2014
Admission routes1
Has abstractyes

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