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Record W2062738036 · doi:10.1371/journal.pone.0046060

Bandoniozyma gen. nov., a Genus of Fermentative and Non-Fermentative Tremellaceous Yeast Species

2012· article· en· W2062738036 on OpenAlexfundno aff
Patrícia Valente, Teun Boekhout, Melissa Fontes Landell, J. Crestani, Fernando C. Pagnocca, Lara Durães Sette, Michel Rodrigo Zambrano Passarini, Carlos A. Rosa, Luciana R. Brandão, Raphael Sânzio Pimenta, José Roberto Ribeiro, Karina Marques Garcia, Ching-Fu Lee, Sung‐Oui Suh, Gábor Péter, Dénes Dlauchy, Jack W. Fell, Gloria Scorzetti, Bart Theelen, Marilene Henning Vainstein

Bibliographic record

VenuePLoS ONE · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicYeasts and Rust Fungi Studies
Canadian institutionsnot available
FundersBeef Cattle Research CouncilAgência Nacional de Energia ElétricaNational Science Foundation
KeywordsBiologyYeastGenusCladeBotanyZoologyPhylogeneticsGeneGenetics

Abstract

fetched live from OpenAlex

BACKGROUND: Independent surveys across the globe led to the proposal of a new basidiomycetous yeast genus within the Bulleromyces clade of the Tremellales, Bandoniozyma gen. nov., with seven new species. METHODOLOGY/PRINCIPAL FINDINGS: The species were characterized by multiple methods, including the analysis of D1/D2 and ITS nucleotide sequences, and morphological and physiological/biochemical traits. Most species can ferment glucose, which is an unusual trait among basidiomycetous yeasts. CONCLUSIONS/SIGNIFICANCE: In this study we propose the new yeast genus Bandoniozyma, with seven species Bandoniozyma noutii sp. nov. (type species of genus; CBS 8364(T) = DBVPG 4489(T)), Bandoniozyma aquatica sp. nov. (UFMG-DH4.20(T) = CBS 12527(T) = ATCC MYA-4876(T)), Bandoniozyma complexa sp. nov. (CBS 11570(T) = ATCC MYA-4603(T) = MA28a(T)), Bandoniozyma fermentans sp. nov. (CBS 12399(T) = NU7M71(T) = BCRC 23267(T)), Bandoniozyma glucofermentans sp. nov. (CBS 10381(T) = NRRL Y-48076(T) = ATCC MYA-4760(T) = BG 02-7-15-015A-1-1(T)), Bandoniozyma tunnelae sp. nov. (CBS 8024(T) = DBVPG 7000(T)), and Bandoniozyma visegradensis sp. nov. (CBS 12505(T) = NRRL Y-48783(T) = NCAIM Y.01952(T)).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.237
Teacher spread0.208 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations143
Published2012
Admission routes1
Has abstractyes

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