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Record W2064584341 · doi:10.2135/cropsci2011.12.0677

Validation of QTL for Grain Yield‐Related Traits on Wheat Chromosome 3A Using Recombinant Inbred Chromosome Lines

2012· article· en· W2064584341 on OpenAlexfundno aff
Neway Mengistu, P. Stephen Baenziger, Kent M. Eskridge, Ismail Dweikat, Stephen N. Wegulo, Kulvinder S. Gill, A. Mujeeb‐Kazi

Bibliographic record

VenueCrop Science · 2012
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicWheat and Barley Genetics and Pathology
Canadian institutionsnot available
FundersHatchU.S. Department of Agriculture
KeywordsQuantitative trait locusBiologyPopulationChromosomeAnthesisInbred strainGeneticsReplicateAlleleCultivarAgronomyGeneMathematicsStatistics

Abstract

fetched live from OpenAlex

ABSTRACT Previously, quantitative trait loci (QTLs) for grain yield (GYLD) and yield‐related traits were identified by using a population of recombinant inbred chromosome lines (RICLs) developed from the wheat ( Triticum aestivum L.) cultivar Cheyenne (CNN) and its substitution line CNN(WI3A), in which the 3A chromosome of cultivar Wichita (WI) was substituted for CNN chromosome 3A. Our objectives were to identify and validate the QTL previously identified in CNN(RICLs3A), using the mirror population WI(RICLs3A). A population of 90 WI(RICLs3A) was used to evaluate GYLD, 1000‐kernel weight (TKW), kernels per spike (KPS), kernels per square meter (KPSM), spikes per square meter (SPSM), grain volume weight (GVW), plant height (PHT), and anthesis date (AD). Data were collected from replicated trials grown in six Nebraska environments from 2008 to 2009. Twelve QTL for GYLD, TKW, KPS, SPSM, GVW, AD, and PHT were detected. The phenotypic variance explained by these QTL ranged from 12% for SPSM to 53% for GVWT. Most of the QTLs were co‐localized in one or two regions of chromosome 3A. The major grain yield QTL ( QGyld.neb.3A.1 ) detected in the combined analysis explained 19% of the phenotypic variance and the substitution of CNN alleles for WI alleles decreased grain yield. Using a different genetic background, this study confirmed most of the GYLD and yield‐related QTL reported in previous RICLs3A mapping studies on chromosome 3A of winter wheat evaluated in Nebraska.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.041
Threshold uncertainty score0.275

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.058
GPT teacher head0.275
Teacher spread0.217 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations32
Published2012
Admission routes1
Has abstractyes

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