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Record W2066893644 · doi:10.1021/ct6002093

The Gradient Curves Method:  An Improved Strategy for the Derivation of Molecular Mechanics Valence Force Fields from ab Initio Data

2007· article· en· W2066893644 on OpenAlexaff
Toon Verstraelen, Dimitri Van Neck, Paul W. Ayers, Véronique Van Speybroeck, Michel Waroquier

Bibliographic record

VenueJournal of Chemical Theory and Computation · 2007
Typearticle
Languageen
FieldMaterials Science
TopicMachine Learning in Materials Science
Canadian institutionsMcMaster University
Fundersnot available
KeywordsForce field (fiction)Parametrization (atmospheric modeling)A priori and a posterioriAb initioTransferabilityComputer scienceField (mathematics)Valence (chemistry)Energy minimizationStatistical physicsApplied mathematicsMathematicsPhysicsQuantum mechanicsArtificial intelligenceMachine learning

Abstract

fetched live from OpenAlex

A novel force-field development strategy is proposed that tackles the well-known difficulty of parameter correlations arising in a conventional least-squares optimization. In the first step of the new gradient curves method (GCM), continuity criteria are imposed to transform the raw multidimensional ab initio training data to distinct sets of one-dimensional data, each associated with an individual energy term. In the second step, the transformed data suggest suitable analytical expressions, and the parameters in these expressions are fitted to the transformed data; that is, one does not have to postulate a priori analytical expressions for the force-field energy terms. This approach facilitates the derivation of valence terms. Benchmarks have been performed on a set of small molecules. The results show that the new method yields physically acceptable energy terms exactly when a conventional parametrization would suffer from parameter correlations, that is, when an increasing number of redundant internal coordinates is used in the force-field model. The generic treatment of parameter correlations in the proposed method facilitates an intuitive physical interpretation of the individual terms in the force-field expression, which is a prerequisite for the transferability of force-field models.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.004
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.002
Open science0.0020.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0040.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.355
Teacher spread0.318 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations22
Published2007
Admission routes1
Has abstractyes

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