Localization-independent Regulation of Homocysteine Secretion by Phosphatidylethanolamine N-Methyltransferase
Bibliographic record
Abstract
Genetic ablation of phosphatidylethanolamine N-methyltransferase (PEMT) in mice causes a 50% reduction in plasma homocysteine (Hcy) levels. Because hyperhomocysteinemia is an independent risk factor for cardiovascular disease, resolution of the molecular basis for this reduction is of significant clinical interest. The PEMT pathway is a metabolically channeled process localized to the endoplasmic reticulum (ER). To assess the importance of PEMT localization for Hcy homeostasis, we identified and ablated the minimal ER targeting motif. Mutagenesis of a conserved, C-terminal lysine residue (197) relocalized the enzyme to the Golgi, demonstrating that Lys-197 is essential for targeting PEMT to the ER. To evaluate the functional significance of PEMT localization, hepatoma cell lines were generated that stably expressed either ER- or Golgi-localized PEMT only. Intriguingly, stable expression of PEMT in either the ER or the Golgi caused increased Hcy secretion. Moreover, PEMT-mediated Hcy secretion correlated with the methyltransferase of the of that Hcy is with PEMT of PEMT Genetic ablation of phosphatidylethanolamine N-methyltransferase (PEMT) in mice causes a 50% reduction in plasma homocysteine (Hcy) levels. Because hyperhomocysteinemia is an independent risk factor for cardiovascular disease, resolution of the molecular basis for this reduction is of significant clinical interest. The PEMT pathway is a metabolically channeled process localized to the endoplasmic reticulum (ER). To assess the importance of PEMT localization for Hcy homeostasis, we identified and ablated the minimal ER targeting motif. Mutagenesis of a conserved, C-terminal lysine residue (197) relocalized the enzyme to the Golgi, demonstrating that Lys-197 is essential for targeting PEMT to the ER. To evaluate the functional significance of PEMT localization, hepatoma cell lines were generated that stably expressed either ER- or Golgi-localized PEMT only. Intriguingly, stable expression of PEMT in either the ER or the Golgi caused increased Hcy secretion. Moreover, PEMT-mediated Hcy secretion correlated with the methyltransferase of the of that Hcy is with PEMT of PEMT Hcy endoplasmic phosphatidylethanolamine endoplasmic phosphatidylethanolamine a risk factor for cardiovascular disease, in and of clinical that hyperhomocysteinemia is with an increased risk of cardiovascular and of risk is an independent risk factor for and plasma Hcy of significant clinical the molecular basis Hcy we that mice for a PEMT a reduction in Hcy PEMT mice Hcy expression of PEMT in a cell that PEMT Hcy secretion the of methyltransferase to the in homocysteine a for PEMT in Hcy is a enzyme that in the of is the for and is the is to and the Hcy of is the of is an in with the in the in and and a and the and Because to is the that ablation of to Hcy The molecular of the PEMT pathway the of a for is localized in the ER and is in a of ER that with The a metabolically of the a significant in to of the ER Because the PEMT pathway is a metabolically channeled process we localization essential to the of PEMT in Hcy evaluate the importance of PEMT localization for Hcy homeostasis, we relocalized PEMT to a and the ER motif. The for ER a lysine residue the or to the C-terminal in and with of the we the minimal ER targeting of PEMT and that PEMT Hcy secretion an ER and were were the of of and were and were of and were and were PEMT localization were generated the a of the PEMT is To the of the ER a and a for were were and the is the of a were the of and of lines were the were in and hepatoma were the of the to the stable were generated the or the were in a of the were with PEMT were for and in for with for were with the for the or were with the for were for with and were with and a in the PEMT were were and and in were for PEMT a and the of PEMT in were a of were with and for with of and or were and cell were with molecular were to and with were with the were to Hcy and of the of were a of were a of a of an ER a ER of PEMT C-terminal ER is in and PEMT the functional of this is the lysine residue the in is in lysine in a to an or residue to ER targeting Because Lys-197 is and of of PEMT to the ER To a functional ER the C-terminal to the PEMT a the ER that in the Lys-197 of PEMT is to with the ER of Lys-197 of PEMT to the the of the in targeting PEMT to the we generated in Lys-197 and the and were to of the a the the PEMT the that the and in this and PEMT and the enzyme significant with the enzyme assess the of in targeting PEMT to the the PEMT were and were the ER PEMT and a for localization the PEMT enzyme with the ER a PEMT in Lys-197 and were to to with the a localization of in a PEMT that either expressed or were and the of in targeting PEMT to the ER of Lys-197 PEMT the ER. were with PEMT or localization or were and with and and PEMT were with and of and PEMT is a Lys-197 and for of PEMT to the residue to the and that the with that is essential for ER localization of Lys-197 caused a of with Moreover, the a localization to that of the of Lys-197 is to ER targeting of the that Lys-197 is essential for of PEMT to the to the that a of Lys-197 or a localization that the of To the localization of the we with the Golgi enzyme the Lys-197 and that of Lys-197 PEMT to the Golgi and the enzyme and the of with with and Lys-197 is essential for targeting PEMT to the causes to the Lys-197 with the Golgi were with PEMT or localization were and with and enzyme and PEMT were with and and of and PEMT is a PEMT of Lys-197 a residue in targeting PEMT to the ER to PEMT that localized to of the the localization of the the significance of PEMT localization in Hcy To assess the functional significance of PEMT localization, cell lines were generated that stably either ER- or Golgi-localized of Lys-197 caused the of PEMT the ER to the Golgi in and hepatoma a for the of and and PEMT the of to To the Golgi-localized PEMT were PEMT localization were with and the of and stable expression of the enzyme caused a significant in the expression of the in a in the demonstrating that of is for PEMT stable expression of of the Golgi-localized PEMT and caused a significant in the with stably with of PEMT the ER the methyltransferase in localization of PEMT in the Golgi the of the ER- and Golgi-localized PEMT in that of the Golgi-localized were in the PEMT that Golgi-localized PEMT the either or an PEMT in hepatoma were stably with PEMT or localization PEMT for with The were and in and The the of in to that in expressed the of in of stable in a Hcy of in the of of a in the of of of to Hcy the of we PEMT Hcy secretion a were that stably expressed ER- or Golgi-localized and Hcy were stable expression of the and in a significant in Hcy stable expression of the Golgi-localized PEMT and increased the secretion of Hcy with that were stably with that PEMT Hcy secretion a of PEMT in the ER or Golgi Hcy secretion. of and Hcy PEMT the of with is to Hcy and Hcy to or or is the cell in and Hcy in a hepatoma that stably PEMT or PEMT localization expressed the of in with PEMT the molecular of Hcy homeostasis, we Hcy secretion is with PEMT lines that stably expressed of PEMT or the Golgi-localized were identified in PEMT To the that Hcy secretion is with PEMT Hcy the cell lines secretion with the of ER- or Golgi-localized hepatoma were stably with PEMT or Golgi-localized PEMT in cell of stable PEMT and The expressed the of in Hcy of stable cell and of Hcy secretion and with cell lines that stably with cell lines that stably expression of either the ER- or Golgi-localized PEMT increased the Hcy Because a in Hcy secretion in stable cell lines a is that the of Hcy secretion ER- or Golgi-localized PEMT is to Hcy secretion with PEMT Moreover, Hcy secretion correlated with methyltransferase of the ER and Golgi-localized PEMT Hcy secretion a and Hcy secretion with PEMT Hcy significant clinical with disease, disease, disease, and of that or for mice that or for a of the a and in plasma Hcy and in the of the that or for a of a and in plasma Hcy mice with and of of we that ablation of PEMT in a reduction in plasma Hcy a for PEMT in Hcy the of Hcy Because a of PEMT in Hcy in the of for the of to the molecular basis of Hcy is the of PEMT with PEMT for a of expression the and were the for plasma Hcy in and the significance of the in Hcy the a for the the expression of PEMT for a in Hcy is localized in the ER of the and in a of the ER the of the enzyme and the that the PEMT pathway is a metabolically channeled process we PEMT localization is essential for Hcy the that ER localization to the of PEMT in Hcy PEMT is an that and is in and is the to the Hcy is the Because the in the of Hcy we that PEMT Hcy of this we that the C-terminal Lys-197 residue is essential for targeting PEMT to the caused the of the enzyme to the of ER of to to the ER a C-terminal of ER a lysine residue the The of this lysine residue in targeting PEMT to the ER to Golgi-localized PEMT methyltransferase that a enzyme the of the PEMT pathway of expression of PEMT in either the ER or the Golgi Hcy secretion. is significant that is and a factor in the that causes the plasma Hcy in PEMT of PEMT Lys-197 to an factor to the of in the to the for of and PEMT for of to significant of Hcy of Hcy generated with of the that a of the secretion of Hcy or the of an in PEMT is that plasma Hcy of the reduction in of is that Hcy secretion is correlated with PEMT and with we identified in PEMT that and the of the enzyme of the of PEMT to the to the of the Golgi-localized PEMT methyltransferase that the enzyme the the a to the of PEMT in Hcy homeostasis, to the of and the enzyme a of PEMT-mediated Hcy secretion the of PEMT the ER the localization of the of the PEMT pathway metabolically of the PEMT in the with an of in Hcy Intriguingly, that the and the of PEMT and the or of an of Hcy we that Lys-197 is essential for targeting PEMT to the of this residue relocalized the methyltransferase to the Golgi-localized PEMT the of the PEMT pathway secretion of Moreover, Hcy secretion with the of ER- and Golgi-localized Because PEMT plasma Hcy homeostasis, the enzyme a for in with of the molecular basis of Hcy in the of and Hcy endoplasmic phosphatidylethanolamine endoplasmic phosphatidylethanolamine a risk factor for cardiovascular disease, in and of clinical that hyperhomocysteinemia is with an increased risk of cardiovascular and of risk is an independent risk factor for and plasma Hcy of significant clinical the molecular basis Hcy we that mice for a PEMT a reduction in Hcy PEMT mice Hcy expression of PEMT in a cell that PEMT Hcy secretion the of methyltransferase to the in homocysteine a for PEMT in Hcy PEMT is a enzyme that in the of is the for and is the is to and the Hcy of is the of is an in with the in the in and and a and the and Because to is the that ablation of to Hcy The molecular of the PEMT pathway the of a for PEMT is localized in the ER and is in a of ER that with The a metabolically of the a significant in to of the ER Because the PEMT pathway is a metabolically channeled process we localization essential to the of PEMT in Hcy To evaluate the importance of PEMT localization for Hcy homeostasis, we relocalized PEMT to a and the ER motif. 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were to Hcy and of Hcy and of the of were a of were a of a the of were a of were a of a of an ER a ER of PEMT C-terminal ER is in and PEMT the functional of this is the lysine residue the in is in lysine in a to an or residue to ER targeting Because Lys-197 is and of of PEMT to the ER To a functional ER the C-terminal to the PEMT a the ER that in the Lys-197 of PEMT is to with the ER of Lys-197 of PEMT to the the of the in targeting PEMT to the we generated in Lys-197 and the and were to of the a the the PEMT the that the and in this and PEMT and the enzyme significant with the enzyme assess the of in targeting PEMT to the the PEMT were and were the ER PEMT and a for localization the PEMT enzyme with the ER a PEMT in Lys-197 and were to to with the a localization of in a PEMT that either expressed or were and the of in targeting PEMT to the ER Lys-197 and for of PEMT to the residue to the and that the with that is essential for ER localization of Lys-197 caused a of with Moreover, the a localization to that of the of Lys-197 is to ER targeting of the that Lys-197 is essential for of PEMT to the to the that a of Lys-197 or a localization that the of To the localization of the we with the Golgi enzyme the Lys-197 and that of Lys-197 PEMT to the Golgi and the enzyme and the of with with and Lys-197 is essential for targeting PEMT to the causes to the Lys-197 with the Golgi were with PEMT or localization were and with and enzyme and PEMT were with and and of and PEMT is a PEMT of Lys-197 a residue in targeting PEMT to the ER to PEMT that localized to of the the localization of the the significance of PEMT localization in Hcy To assess the functional significance of PEMT localization, cell lines were generated that stably either ER- or Golgi-localized of Lys-197 caused the of PEMT the ER to the Golgi in and hepatoma a for the of and and PEMT the of to To the Golgi-localized PEMT were PEMT localization were with and the of and stable expression of the enzyme caused a significant in the expression of the in a in the demonstrating that of is for PEMT stable expression of of the Golgi-localized PEMT and caused a significant in the with stably with of PEMT the ER the methyltransferase in localization of PEMT in the Golgi the of the ER- and Golgi-localized PEMT in that of the Golgi-localized were in the PEMT that Golgi-localized PEMT the either or an PEMT in hepatoma were stably with PEMT or localization PEMT for with The were and in and The the of in to that in expressed the of in of stable in a Hcy of in the of of a in the of of of to Hcy the of we PEMT Hcy secretion a were that stably expressed ER- or Golgi-localized and Hcy were stable expression of the and in a significant in Hcy stable expression of the Golgi-localized PEMT and increased the secretion of Hcy with that were stably with that PEMT Hcy secretion a of PEMT in the ER or Golgi Hcy secretion. of and Hcy PEMT the of with is to Hcy and Hcy to or or is the cell in and Hcy in a hepatoma that stably PEMT or PEMT localization expressed the of in with PEMT the molecular of Hcy homeostasis, we Hcy secretion is with PEMT lines that stably expressed of PEMT or the Golgi-localized were identified in PEMT To the that Hcy secretion is with PEMT Hcy the cell lines secretion with the of ER- or Golgi-localized hepatoma were stably with PEMT or Golgi-localized PEMT in cell of stable PEMT and The expressed the of in Hcy of stable cell and of Hcy secretion and with cell lines that stably with cell lines that stably expression of either the ER- or Golgi-localized PEMT increased the Hcy Because a in Hcy secretion in stable cell lines a is that the of Hcy secretion ER- or Golgi-localized PEMT is to Hcy secretion with PEMT Moreover, Hcy secretion correlated with methyltransferase of the ER and Golgi-localized PEMT Hcy secretion a and Hcy secretion with PEMT of an ER a ER of PEMT C-terminal ER is in and PEMT the functional of this is the lysine residue the in is in lysine in a to an or residue to ER targeting Because Lys-197 is and of of PEMT to the ER To a functional ER the C-terminal to the PEMT a the ER that in the Lys-197 of PEMT is to with the ER of Lys-197 of PEMT to the the of the in targeting PEMT to the we generated in Lys-197 and the and were to of the a the the PEMT the that the and in this and PEMT and the enzyme significant with the enzyme To assess the of in targeting PEMT to the the PEMT were and were the ER PEMT and a for localization the PEMT enzyme with the ER a PEMT in Lys-197 and were to to with the a localization of in a PEMT that either expressed or were and the of in targeting PEMT to the ER To Lys-197 and for of PEMT to the residue to the and that the with that is essential for ER localization of Lys-197 caused a of with Moreover, the a localization to that of the of Lys-197 is to ER targeting of the that Lys-197 is essential for of PEMT to the ER. to the that a of Lys-197 or a localization that the of To the localization of the we with the Golgi enzyme the Lys-197 and that of Lys-197 PEMT to the Golgi and the enzyme and the of with with and Lys-197 is essential for targeting PEMT to the causes to the Golgi-localized PEMT of Lys-197 a residue in targeting PEMT to the ER to PEMT that localized to of the the localization of the the significance of PEMT localization in Hcy To assess the functional significance of PEMT localization, cell lines were generated that stably either ER- or Golgi-localized of Lys-197 caused the of PEMT the ER to the Golgi in and hepatoma a for the of and and PEMT PEMT the of to To the Golgi-localized PEMT were PEMT localization were with and the of and stable expression of the enzyme caused a significant in the expression of the in a in the demonstrating that of is for PEMT stable expression of of the Golgi-localized PEMT and caused a significant in the with stably with of PEMT the ER the methyltransferase in localization of PEMT in the Golgi the of the ER- and Golgi-localized PEMT in that of the Golgi-localized were in the PEMT that Golgi-localized PEMT the either or an PEMT Hcy of in the of of a in the of of of to Hcy the of we PEMT Hcy secretion a were that stably expressed ER- or Golgi-localized and Hcy were stable expression of the and in a significant in Hcy stable expression of the Golgi-localized PEMT and increased the secretion of Hcy with that were stably with that PEMT Hcy secretion a Hcy with PEMT the molecular of Hcy homeostasis, we Hcy secretion is with PEMT lines that stably expressed of PEMT or the Golgi-localized were identified in PEMT To the that Hcy secretion is with PEMT Hcy the cell lines expression of either the ER- or Golgi-localized PEMT increased the Hcy Because a in Hcy secretion in stable cell lines a is that the of Hcy secretion ER- or Golgi-localized PEMT is to Hcy secretion with PEMT Moreover, Hcy secretion correlated with methyltransferase of the ER and Golgi-localized PEMT Hcy secretion a and Hcy secretion with PEMT Hcy significant clinical with disease, disease, disease, and of that or for mice that or for a of the a and in plasma Hcy and in the of the that or for a of a and in plasma Hcy mice with and of of we that ablation of PEMT in a reduction in plasma Hcy a for PEMT in Hcy the of Hcy Because a of PEMT in Hcy in the of for the of to the molecular basis of Hcy is the of PEMT with PEMT for a of expression the and were the for plasma Hcy in and the significance of the in Hcy the a for the the expression of PEMT for a in Hcy is localized in the ER of the and in a of the ER the of the enzyme and the that the PEMT pathway is a metabolically channeled process we PEMT localization is essential for Hcy the that ER localization to the of PEMT in Hcy PEMT is an that and is in and is the to the Hcy is the Because the in the of Hcy we that PEMT Hcy of this we that the C-terminal Lys-197 residue is essential for targeting PEMT to the caused the of the enzyme to the of ER of to to the ER a C-terminal of ER a lysine residue the The of this lysine residue in targeting PEMT to the ER to Golgi-localized PEMT methyltransferase that a enzyme the of the PEMT pathway of expression of PEMT in either the ER or the Golgi Hcy secretion. is significant that is and a factor in the that causes the plasma Hcy in PEMT of PEMT Lys-197 to an factor to the of in the to the for of and PEMT for of to significant of Hcy of Hcy generated with of the that a of the secretion of Hcy or the of an in PEMT is that plasma Hcy of the reduction in of is that Hcy secretion is correlated with PEMT and with we identified in PEMT that and the of the enzyme of the of PEMT to the to the of the Golgi-localized PEMT methyltransferase that the enzyme the the a to the of PEMT in Hcy homeostasis, to the of and the enzyme a of PEMT-mediated Hcy secretion the of PEMT the ER the localization of the of the PEMT pathway metabolically of the PEMT in the with an of in Hcy Intriguingly, that the and the of PEMT and the or of an of Hcy we that Lys-197 is essential for targeting PEMT to the of this residue relocalized the methyltransferase to the Golgi-localized PEMT the of the PEMT pathway secretion of Moreover, Hcy secretion with the of ER- and Golgi-localized Because PEMT plasma Hcy homeostasis, the enzyme a for in with of the molecular basis of Hcy in the of and Hcy significant clinical with disease, disease, disease, and of that or for mice that or for a of the a and in plasma Hcy and in the of the that or for a of a and in plasma Hcy mice with and of of we that ablation of PEMT in a reduction in plasma Hcy a for PEMT in Hcy the of Hcy Because a of PEMT in Hcy in the of for the of to the molecular basis of Hcy secretion. The is the of PEMT with PEMT for a of expression the and were the for plasma Hcy in and the significance of the in Hcy the a for the the expression of PEMT for a in Hcy PEMT is localized in the ER of the and in a of the ER the of the enzyme and the that the PEMT pathway is a metabolically channeled process we PEMT localization is essential for Hcy the that ER localization to the of PEMT in Hcy PEMT is an that and is in and is the to the Hcy is the Because the in the of Hcy we that PEMT Hcy of this we that the C-terminal Lys-197 residue is essential for targeting PEMT to the caused the of the enzyme to the of ER of to to the ER a C-terminal of ER a lysine residue the The of this lysine residue in targeting PEMT to the ER to Golgi-localized PEMT methyltransferase that a enzyme the of the PEMT pathway of expression of PEMT in either the ER or the Golgi Hcy secretion. is significant that is and a factor in the that causes the plasma Hcy in PEMT of PEMT Lys-197 to an factor to the of in the to the for of and PEMT for of to significant of Hcy of Hcy generated with of the that a of the secretion of Hcy or the of an in PEMT is that plasma Hcy of the reduction in of is that Hcy secretion is correlated with PEMT and with we identified in PEMT that and the of the enzyme of the of PEMT to the to the of the Golgi-localized PEMT methyltransferase that the enzyme the the a to the of PEMT in Hcy homeostasis, to the of and the enzyme a of PEMT-mediated Hcy secretion the of PEMT the ER the localization of the of the PEMT pathway metabolically of the PEMT in the with an of in Hcy Intriguingly, that the and the of PEMT and the or of an of Hcy we that Lys-197 is essential for targeting PEMT to the of this residue relocalized the methyltransferase to the Golgi-localized PEMT the of the PEMT pathway secretion of Moreover, Hcy secretion with the of ER- and Golgi-localized Because PEMT plasma Hcy homeostasis, the enzyme a for in with of the molecular basis of Hcy in the of and and for and for with
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How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".