Interaction of Integrin-linked Kinase with the Kidney Chloride/Bicarbonate Exchanger, kAE1
Bibliographic record
Abstract
Kidney anion exchanger 1 (kAE1) mediates chloride/bicarbonate exchange at the basolateral membrane of kidney α-intercalated cells, thereby facilitating bicarbonate reabsorption into the blood. Human kAE1 lacks the N-terminal 65 residues of the erythroid form (AE1, band 3), which are essential for binding of cytoskeletal and cytosolic proteins. Yeast two-hybrid screening identified integrin-linked kinase (ILK), a serine/threonine kinase, and an actin-binding protein as an interacting partner with the N-terminal domain of kAE1. Interaction between kAE1 and ILK was confirmed in co-expression experiments in HEK 293 cells and is mediated by a previously unidentified calponin homology domain in the kAE1 N-terminal region. The calponin homology domain of kAE1 binds the C-terminal catalytic domain of ILK to enhance association of kAE1 with the actin cytoskeleton. Overexpression of ILK increased kAE1 levels at the cell surface as shown by flow cytometry, cell surface biotinylation, and anion transport activity assays. Pulse-chase experiments revealed that ILK associates with kAE1 early in biosynthesis, likely in the endoplasmic reticulum. ILK co-localized with kAE1 at the basolateral membrane of polarized Madin-Darby canine kidney cells and in α-intercalated cells of human kidneys. Taken together these results suggest that ILK and kAE1 traffic together from the endoplasmic reticulum to the basolateral membrane. ILK may provide a linkage between kAE1 and the underlying actin cytoskeleton to stabilize kAE1 at the basolateral membrane, resulting in higher levels of cell surface expression. Kidney anion exchanger 1 (kAE1) mediates chloride/bicarbonate exchange at the basolateral membrane of kidney α-intercalated cells, thereby facilitating bicarbonate reabsorption into the blood. Human kAE1 lacks the N-terminal 65 residues of the erythroid form (AE1, band 3), which are essential for binding of cytoskeletal and cytosolic proteins. Yeast two-hybrid screening identified integrin-linked kinase (ILK), a serine/threonine kinase, and an actin-binding protein as an interacting partner with the N-terminal domain of kAE1. Interaction between kAE1 and ILK was confirmed in co-expression experiments in HEK 293 cells and is mediated by a previously unidentified calponin homology domain in the kAE1 N-terminal region. The calponin homology domain of kAE1 binds the C-terminal catalytic domain of ILK to enhance association of kAE1 with the actin cytoskeleton. Overexpression of ILK increased kAE1 levels at the cell surface as shown by flow cytometry, cell surface biotinylation, and anion transport activity assays. Pulse-chase experiments revealed that ILK associates with kAE1 early in biosynthesis, likely in the endoplasmic reticulum. ILK co-localized with kAE1 at the basolateral membrane of polarized Madin-Darby canine kidney cells and in α-intercalated cells of human kidneys. Taken together these results suggest that ILK and kAE1 traffic together from the endoplasmic reticulum to the basolateral membrane. ILK may provide a linkage between kAE1 and the underlying actin cytoskeleton to stabilize kAE1 at the basolateral membrane, resulting in higher levels of cell surface expression. Anion exchanger 1 (AE1, 6The abbreviations used are: AE1, anion exchanger 1; kAE1, kidney AE1; eAE1, erythroid AE1; CH, calponin homology; CHAPS, 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonic acid; ILK, integrin-linked kinase; HA, hemagglutinin; BSA, bovine serum albumin; PBS, phosphate-buffered saline; MDCK, Madin-Darby canine kidney cells; dRTA, distal renal tubular acidosis; PH, pleckstrin homology. band 3, SLC4A1) is a bicarbonate transporter involved in maintaining acid-base homeostasis in the human body (1Godinich M.J. Jennings M.L. Curr. Opin Nephrol. Hypertens. 1995; 4: 398-401Crossref PubMed Scopus (14) Google Scholar). There are two human forms of AE1, erythroid (eAE1) and kidney (kAE1). eAE1 or band 3, is the major integral membrane glycoprotein of the erythrocyte, where it serves dual roles of Cl−/HCO3− exchange and cytoskeletal anchorage to red cell membranes (2Zhang D. Kiyatkin A. Bolin J.T. Low P.S. Blood. 2000; 96: 2925-2933Crossref PubMed Google Scholar). kAE1 is the basolateral Cl−/HCO3− exchanger of the acid-secreting α-intercalated cell of the kidney distal tubule (3Tanner M.J. Mol. Membr. Biol. 1997; 14: 155-165Crossref PubMed Scopus (187) Google Scholar). Transcription of eAE1 in erythroid precursors is under the control of an erythroid-specific promoter upstream of exon 1, whereas renal transcription arises from a distinct promoter within intron 3 of the AE1 gene (4Schofield A.E. Martin P.G. Spillett D. Tanner M.J. Blood. 1994; 84: 2000-2012Crossref PubMed Google Scholar). Thus, the resultant kidney transcript encodes the kAE1 polypeptide lacking 65 amino acids present at the N terminus of human eAE1 (5Brosius F.C. II I Alper S.L. Garcia A.M. Lodish H.F. J. Biol. Chem. 1989; 264: 7784-7787Abstract Full Text PDF PubMed Google Scholar). This structural alteration causes major functional between eAE1 and kAE1. The N terminus of eAE1 with and (3Tanner M.J. Mol. Membr. Biol. 1997; 14: 155-165Crossref PubMed Scopus (187) Google S.L. A. D. D. J. 1994; PubMed Scopus Google whereas the N terminus of kAE1 to these J. Biol. Chem. 1994; Full Text PDF PubMed Google Low P.S. J. Biol. Chem. 1995; Full Text Full Text PDF PubMed Scopus Google Scholar). The of the N-terminal domain of eAE1 revealed a of and as an N-terminal domain and a C-terminal domain (2Zhang D. Kiyatkin A. Bolin J.T. Low P.S. Blood. 2000; 96: 2925-2933Crossref PubMed Google is for kAE1. of eAE1 form the in the of a of in kAE1 may the of the cytosolic thereby protein the of in α-intercalated cells a protein anion exchanger was to with N-terminal kAE1 to eAE1 J. J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google Scholar). Human with human kAE1 and to the Mol. Membr. Biol. PubMed Scopus (14) Google Scholar). This to the with the N-terminal domain of kAE1 in human kidney of the AE1 gene distal renal tubular the of in α-intercalated cells J. Nephrol. 2000; 14: PubMed Scopus Google S.L. Google Scholar). AE1 with are residues and and an at the terminus AE1 to are and by the of and to the cell surface of the or the to the membrane of the basolateral membrane of cells which results in bicarbonate the basolateral membrane J. Google Scholar). in the N-terminal domain of kAE1 to with of the N terminus of kAE1 and C-terminal in the of the in Madin-Darby canine kidney cells, I that a within the kAE1 N terminus with the terminus for kAE1 basolateral A.M. Tanner M.J. J. PubMed Scopus Google Scholar). kidney a basolateral in the N-terminal F.C. J. PubMed Scopus Google Scholar). the that of kAE1 in to the basolateral membrane, the by which kAE1 is to the basolateral membrane of distal renal tubule cells and is kAE1 and it to that with kAE1. used two-hybrid screening of a human kidney to that with the domain of kAE1. that integrin-linked kinase (ILK), a serine/threonine kinase and actin-binding with the N-terminal domain of kAE1. The between the two was confirmed by and of these in human kidney The in the N-terminal domain of kAE1 that with ILK was of ILK in increased functional of kAE1 at the cell ILK with kAE1 early in that the two traffic together from the endoplasmic reticulum to the cell the basolateral membrane, ILK may to kAE1 to the underlying thereby kAE1 at the cell surface to membrane levels of transport Yeast N terminus of human kidney anion exchanger 1 was used to for interacting from a human kidney the two-hybrid to amino acids of AE1 was by and used as and in the domain at the and used as The resulting confirmed by of the was by to the The was into the PubMed Scopus Google Scholar). Yeast with a human kidney to the domain in the was with the that was with the 1 lacking and and The for at by This gene is and to the binds to the in J. PubMed Scopus Google Scholar). into and for with the human and into as of and to the human integrin-linked kinase was kAE1 was into and of by and the The was at the This kAE1 was calponin homology domain identified in the N terminus of kAE1 with amino acids was as with The with and at the was into with at the This was Human kidney of was used as for of ILK, and The was into the and of the The the for ILK with a of amino acids at the N was by as The of of used as to ILK ILK and ILK, the The of ILK and into and of confirmed by and for was with the Human kidney cells in with bovine and in at at a of or HEK 293 cells with of and of ILK in with to a of of the A.E. J. Biol. PubMed Scopus Google Scholar). and and to membrane J. PubMed Scopus Google J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google Scholar). with or with kAE1 and ILK or kAE1 The cells with of phosphate-buffered 3 and to in of for at and with of bovine serum and for as previously J. PubMed Scopus Google J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google Scholar). by and J. PubMed Scopus Google J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google Scholar). 293 cells kAE1 and ILK or kAE1 and in 1 of with of for at with was by at for and with with the with and at 65 for to and 293 cells with kAE1 and ILK or kAE1 with and with of 3 and for and by at for at The was for The was in of and was to the and for was by at for to the which proteins. and and for kAE1 was previously J. J. PubMed Scopus Google Scholar). HEK 293 cells with ILK and kAE1. of the cells for 1 and in and at The protein was to and protein of kAE1 was with of AE1 and by protein ILK was a by and by HEK 293 cells with of and with of in and for was by the cells with and with of for was by of the was for The was with for at with to the proteins. 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PubMed Scopus Google with between and by of the of of kAE1 and ILK and the with at and of the renal at in of 1 with a The resulting was at for at and the was at for 1 at The resulting was in of for 1 at with an was and the was of a and The was at for at in a from the of the at the of the The of kAE1 and ILK in the and was by and with that with kAE1, a two-hybrid was the N-terminal domain of kAE1, acids of human as The was into and of protein was by The with was used to a human kidney to the in 1 lacking and and the This screening that and the a was used to the of from screening with in of from the and into the The with with the and and identified as by The between and was used as a or with which was used as of ILK with the N-terminal domain of in a from and to in the the identified and ILK was identified and for the and of ILK that it a in of kAE1 and Interaction of kAE1 and ILK in HEK 293 kAE1 was with an at whereas ILK was at the N of the in HEK 293 cells protein at a of for kAE1 the The two in HEK cells and a band in two major at in and the the band the band as ILK and the band as a the of ILK and ILK a that the ILK was higher ILK experiments HEK 293 cells kAE1 and ILK or kAE1 to the identified in the two-hybrid ILK was from the cell the and kAE1 was an kAE1 was of ILK, the of an the control a band of kAE1 was resulting from by the the of the protein the which was N-terminal ILK was with kAE1, or kAE1 was with of an kAE1 was present in the with ILK as with kAE1 to Thus, band was by suggest that ILK and kAE1 in a in HEK of the in the ILK interacting with kAE1, experiments ILK is a lacking amino acids the and domain at the N for of ILK to J. J. PubMed Google Scholar). HEK 293 cells with kAE1 and or with kAE1 with to kAE1 that the C-terminal catalytic domain of ILK is for kAE1 The band was binding of protein to in cell band was in the The of ILK kinase activity in ILK is at two an ILK is for ILK with of kinase activity of ILK in the ILK with kinase J. A. PubMed Scopus Google J.T. D. J. J. J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google Scholar). the ILK binding to and J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google Scholar). the of ILK kinase activity in kAE1 binding of kAE1 and the and ILK ILK to kAE1 and The at the to a and higher at the are 3 and in and results that the terminus of ILK is to kAE1, and kinase activity of ILK is for the in kAE1 a for C-terminal domain of ILK binding for and the and J. Biol. PubMed Scopus Google PubMed Scopus Google Scholar). and ILK to the of ILK to the actin cytoskeleton J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google A. J. Biol. PubMed Scopus Google Scholar). kAE1 with the terminus of ILK, kAE1 a of the N terminus of kAE1 and calponin and which the amino are and PubMed Scopus Google Full Text Full Text PDF PubMed Scopus Google it is that the of the N-terminal of kAE1 with the homology is at the The of the domain from was with the for amino acids of kAE1. The kAE1 domain is from the for the eAE1 domain (2Zhang D. Kiyatkin A. Bolin J.T. Low P.S. Blood. 2000; 96: 2925-2933Crossref PubMed Google Scholar). The domain in the N-terminal domain of kAE1 is to the domain in at the N terminus of the domain to of binding PubMed Scopus Google 1994; PubMed Scopus Google A. J. 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The of ILK the cell surface of kAE1 in HEK 293 cells was by flow the kAE1 at the cell the was into the of kAE1 J. 4: PubMed Scopus Google Scholar). with levels of with the HEK 293 cells kAE1 at cell surface an of of the cell levels of the of control of kAE1 with ILK an in the of kAE1 cells, to results that of ILK increased the of cell surface of kAE1 in HEK 293 of ILK Cl−/HCO3− of of kAE1 cell surface by ILK that ILK the of Cl−/HCO3− exchange activity of these cells to and to facilitating Cl−/HCO3− Cl−/HCO3− exchange activity was by of with by of the of in the of of with a of transport activity which was from the of cells of the cell for kAE1 and for kAE1 that of of transport activity the of the and it is that ILK increased the of of in the with a the Cl−/HCO3− exchange revealed that ILK increased kAE1 transport activity by The that the of ILK was to HEK cells was with ILK to anion exchange assays. that the of with from to was in ILK and cells The of ILK anion exchange activity the of kAE1. the of the in transport the that ILK increased the of kAE1. that ILK the of kAE1 in HEK 293 cells to kAE1 kAE1 was with The in transport activity of kAE1, ILK is in with the in cell surface and is by an in the of kAE1 expression. ILK and kAE1 in the for the of cell surface of kAE1 by ILK, the of ILK and kAE1 biosynthesis, the HEK 293 cells with kAE1, with or ILK, with for and with for and AE1 used to the and kAE1, Kidney AE1 was the and the it was at Kidney AE1 with that the of kAE1 in HEK 293 cells is 2000; PubMed Scopus Google Scholar). The in that ILK is present the ILK and kAE1 a was ILK and kAE1 in HEK 293 cells, and with of for 1 by a ILK and by with AE1 to kAE1 and with to revealed the of ILK and kAE1 in HEK 293 cells was the of kAE1 and ILK in the was the kAE1 and a of the the of kAE1 with that kAE1 with ILK the domain of kAE1 3 and as binding in in with the actin cytoskeleton J. Biol. PubMed Scopus Google A. J. Biol. 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J. Full Text Full Text PDF PubMed Scopus Google Mol. Biol. PubMed Scopus Google and in human kidney cells with the of kAE1 in α-intercalated cells of the (3Tanner M.J. Mol. Membr. Biol. 1997; 14: 155-165Crossref PubMed Scopus (187) Google Scholar). confirmed these and of ILK and kAE1 at the basolateral surface of human α-intercalated shown is in these that an protein the of the that amino acids of human kAE1 to ILK to an amino with to of calponin and The to a calponin homology a protein previously shown to with identified the C-terminal kinase domain of ILK as kAE1 ILK, which amino acids into structural was as a protein J. PubMed Scopus Google Scholar). The N terminus of ILK by a pleckstrin and a C-terminal kinase catalytic domain J. PubMed Scopus Google Scholar). The at the N terminus of ILK with the Mol. Biol. PubMed Scopus Google whereas the C-terminal of ILK with and J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google J. PubMed Scopus Google J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google Scholar). ILK catalytic activity is for with kinase J. A. PubMed Scopus Google J.T. D. J. J. J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google and J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google ILK kinase activity was essential for with kAE1, with kAE1. that and with the terminus of ILK J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google Scholar). ILK with as the in the C-terminal of ILK and ILK are likely distinct residues of the ILK terminus are for binding J. Biol. PubMed Scopus Google whereas binds to the domain ILK binds as as ILK, and the between an of the actin cytoskeleton J. Biol. 2000; PubMed Scopus Google Scholar). kAE1 may with ILK at a from and identified the in kAE1 that mediates ILK of the N terminus of kAE1 and the domain that amino residues of the kAE1 N terminus with The domain is a protein of amino identified at the N terminus of an actin-binding protein of PubMed Scopus Google J. D. Full Text Full Text PDF PubMed Scopus Google Scholar). The is between of from to Full Text Full Text PDF PubMed Scopus Google Scholar). the kAE1 domain is as it and with and calponin the identified as the structural between the N terminus of kAE1 and the domain from human Biol. 1997; 4: PubMed Scopus Google by The of the domain is of of a and of to present in the between the J. D. Full Text Full Text PDF PubMed Scopus Google Scholar). The for human eAE1 domain that the to residues of kAE1 to the of the domain 3, and are and are by of the to a surface two of the is to that the for the N terminus of kAE1 was by the eAE1 N terminus from the eAE1 (2Zhang D. Kiyatkin A. Bolin J.T. Low P.S. Blood. 2000; 96: 2925-2933Crossref PubMed Google Scholar). the eAE1 N terminus forms the of the domain shown in the of the of kAE1 the it is likely that the to the by of the eAE1 N that the of the kAE1 N-terminal the domain of Taken that the catalytic domain of ILK with the kAE1 domain in the N-terminal of kAE1. of ILK increased the Cl−/HCO3− exchange of This in transport activity with the of kAE1 cell surface that ILK associates with kAE1 early in biosynthesis, likely in the endoplasmic that the of kAE1 to the membrane may by with that actin may involved in cell surface of kAE1. that the association between ILK, and the to the actin cytoskeleton the domain J. Biol. Chem. Full Text Full Text PDF PubMed Scopus Google Scholar). ILK may kAE1 to the actin cytoskeleton the results that the and from HEK 293 cells that the of the kAE1 to the actin cytoskeleton. The was confirmed by the that ILK increased association of kAE1 with of increased association with the actin cytoskeleton Taken kAE1 was to actin cytoskeleton with the revealed that ILK in kidney membrane to the of This is the for that the of ILK in the kidney is kAE1, higher in the from the cytoskeleton. ILK was in the the of ILK was in distinct from kAE1. suggest the was by the membrane or kAE1 with ILK that is of ILK to a cytoskeletal with HEK 293 cells, where kAE1 and ILK in a that The may the that the kidney was cell that ILK, the α-intercalated cells that kAE1, the of is likely higher in HEK 293 cells in the HEK 293 cells early association of ILK and kAE1, of a in membrane and cytoskeletal early in in a a with kAE1 and domain to with ILK, the of kAE1 with the actin cytoskeleton with with ILK at a distinct from kAE1 that to to actin from kAE1. ILK which in binds J. Biol. 2000; PubMed Scopus Google the domain of with kAE1 for with ILK and to with actin The association of kAE1 with the actin cytoskeleton a and of kAE1 to the basolateral membrane of α-intercalated cells in the it to kAE1 or to the basolateral membrane, it is that are to the of kAE1 within the cell and control to the membrane. kAE1 two basolateral in the N terminus and in the at the N or terminus in of the that the of is essential for basolateral of kAE1 A.M. Tanner M.J. J. PubMed Scopus Google Scholar). The of the N-terminal basolateral of human kAE1 to The of kAE1 cell surface by ILK is to is to the cell surface and a of transport This to that may present in cells where is from HEK 293 cells J. J. PubMed Google Scholar). ILK may a for as as for kAE1. the of ILK in is The of ILK in with the of a band of human with together suggest that ILK is present in human in the the of ILK in ILK is as or A. J. Biol. PubMed Scopus Google J. PubMed Scopus Google it is that ILK is in the of eAE1 and ILK in the that the form a to the AE1 of integral membrane protein in the PubMed Scopus Google these cells an for eAE1, that the to with these for the that kAE1 with the terminus of ILK the previously calponin homology domain in the kAE1 N-terminal region. ILK the of kAE1 to membrane of HEK 293 cells by kAE1 with the actin cytoskeleton the The increased of membrane kAE1 Cl−/HCO3− transport Jennings of for the and for human kidney and and of for ILK the of for with of human kidney with
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How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.001 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".