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Record W2071577610 · doi:10.1080/07060661.2012.664566

Physiological specialization in the western Canadian population of<i>Phaeosphaeria nodorum</i>

2012· article· en· W2071577610 on OpenAlexafffundvenueabout
Erin Dawn Matlock, Curt A. McCartney, J. Gilbert

Bibliographic record

VenueCanadian Journal of Plant Pathology · 2012
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicWheat and Barley Genetics and Pathology
Canadian institutionsAgriculture and Agri-Food CanadaUniversity of Saskatchewan
FundersMinistry of Agriculture - Saskatchewan
KeywordsPathosystemBiologyHost (biology)Common wheatPopulationPlant disease resistanceVirulenceUPGMASeedlingInoculationAgronomyGeneGeneticsHorticultureGenetic variationDemography

Abstract

fetched live from OpenAlex

Stagonospora nodorum blotch (SNB) caused by Phaeosphaeria nodorum is an important foliar disease of wheat. Efficient breeding for SNB resistance requires detailed knowledge of the pathosystem so that targeted improvements can be made. The objective of this study was to examine the wheat–P. nodorum pathosystem for evidence of host specificity amongst Canadian isolates. To this end, 49 P. nodorum isolates were inoculated on 16 wheat lines in indoor seedling inoculation experiments. Biologically significant host × pathogen interactions were identified, indicating that host specificity exists in the Canadian isolates tested. This observation is consistent with an inverse gene-for-gene pathosystem based upon host-selective toxins. Unweighted Pair Group Method with Arithmetic Mean (UPGMA) analysis of disease reaction data suggested nine virulence clusters; however, additional sub-groupings could be argued based upon the reaction of specific wheat lines to isolates within virulence clusters. The common wheat lines 86ISMN 2137, RL5407 and W7984 had good resistance to the P. nodorum isolates in seedling tests, which will be useful for improvements in common wheat and possibly durum wheat. The development of a SNB differential set is discussed. P. nodorum isolates characterized in this study will be useful for future studies in the wheat–P. nodorum pathosystem.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.127
Threshold uncertainty score0.256

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0020.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.212
Teacher spread0.184 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2012
Admission routes4
Has abstractyes

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Same venueCanadian Journal of Plant PathologySame topicWheat and Barley Genetics and PathologyFrench-language works237,207